Structure of PDB 8gyg Chain B Binding Site BS02
Receptor Information
>8gyg Chain B (length=305) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SASDVKDEWITLGTMGGPIPHATHSQPSNALFVNGHTYIVDAGDGTVGQL
TKAGLKTTDVDAVFISHLHFDHTGGLPALLSLRWQVNAGNELTVYGPPGI
KETVDGIFAFMKYGAAGHYGVPGQIPEPANRKVNVVELTDGDKVSLEDFT
LTAVRNTHFSWPEGSDEWKKYQALSFKFELEDYTVVYTGDTGPSKAVELL
AKNADMLISEMMDVEHTVNLVKRAHPHMPAQASKHLSQHLSTHHLTSGEV
GQLAANANVKKVVITHMAPGLTAPAEYKKYSNEIAAFYQGDITLANDLDR
FLLQR
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
8gyg Chain B Residue 402 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8gyg
Purification ,Crystallization and X-ray Diffraction analysis of a novel arysulfatase from Pseudoalteromonas atlantica T6c
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
D72 H73 D191 H267
Binding residue
(residue number reindexed from 1)
D71 H72 D190 H266
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0016787
hydrolase activity
GO:0042781
3'-tRNA processing endoribonuclease activity
GO:0046872
metal ion binding
Biological Process
GO:0042780
tRNA 3'-end processing
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8gyg
,
PDBe:8gyg
,
PDBj:8gyg
PDBsum
8gyg
PubMed
UniProt
A0A9J9EP68
[
Back to BioLiP
]