Structure of PDB 8ghy Chain B Binding Site BS02
Receptor Information
>8ghy Chain B (length=362) Species:
1754191
(Piromyces finnis) [
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SNAIRDISSIELIKEMRFGWNLGNTLDAECTSWMDYEKNPIGSETCWGNV
KTNEDIFKTLMDNQFNVFRIPTTWTGHIGEAPEYKINEQWMKRVHEIVDY
PYKNGAFVILNIHHETWNHAFAETVDEAKVELAQVWKQIAEEFKGYGERL
IFEGQNAPRKNGTPVEWNGGDKEGWDVVNAMNAVFLETVRSSGGNNAKRH
LMIPPYAAACNENSFKNFDFPEDDDKVIASVHAYSPYNFALNNGEGAVDK
FDASGKNELDWNINLMKKRFVDQGIPMILGEYGAMNRDNEEERAAWAEYY
MEKITALGVPQVWWDNGVFEGEGERFGLIDRKNLKIVYPSIVAALQKGRG
LEVNVLHAIETE
Ligand information
Ligand ID
BGC
InChI
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKey
WQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370
OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6
C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01
OC1C(O)C(OC(O)C1O)CO
Formula
C6 H12 O6
Name
beta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBL
CHEMBL1614854
DrugBank
DB02379
ZINC
ZINC000003833800
PDB chain
8ghy Chain E Residue 2 [
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Receptor-Ligand Complex Structure
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PDB
8ghy
Structure and enzymatic characterization of CelD endoglucanase from the anaerobic fungus Piromyces finnis.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
N21 H111 W311 N313 E321
Binding residue
(residue number reindexed from 1)
N24 H114 W314 N316 E324
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004553
hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0000272
polysaccharide catabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8ghy
,
PDBe:8ghy
,
PDBj:8ghy
PDBsum
8ghy
PubMed
37548665
UniProt
A0A1Y1V643
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