Structure of PDB 8exr Chain B Binding Site BS02
Receptor Information
>8exr Chain B (length=295) Species:
1280
(Staphylococcus aureus) [
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MAKLLIMSIVSFCFIFLLLLFFRYILKRYFNYMLNYKVWYLTLLAGLIPF
IPIKFNWDSIDNICTVIWIVLVIILSFKFLKALLYLKYLKKQSLYLNENE
KNKIDTILFNHQYKKNIVIRKAETIQSPITFWYGKYIILIPSSYFKSVID
KRLKYIILHEYAHAKNRDTLHLIIFNIFSIIMSYNPLVHIVKRKIIHDNE
VEADRFVLNNINKNEFKTYAESIMDSVLNVPFFNKNILSHSFNGKKSLLK
RRLINIKEANLKKQSKLILIFICIFTFLLMVIQSQFLMGQSITDY
Ligand information
Ligand ID
P6L
InChI
InChI=1S/C40H75O10P/c1-3-5-7-9-11-13-15-17-18-20-21-23-25-27-29-31-39(43)47-35-38(36-49-51(45,46)48-34-37(42)33-41)50-40(44)32-30-28-26-24-22-19-16-14-12-10-8-6-4-2/h18,20,22,24,37-38,41-42H,3-17,19,21,23,25-36H2,1-2H3,(H,45,46)/b20-18+,24-22-/t37-,38+/m1/s1
InChIKey
WLVNRDXLPAAELE-GDRYEXQRSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
CCCCCCCCCC=CCCCCCCC(=O)OCC(COP(=O)(O)OCC(CO)O)OC(=O)CCCCC=CCCCCCCCCC
CACTVS 3.341
CCCCCCCCC/C=C/CCCCCCC(=O)OC[C@@H](CO[P@@](O)(=O)OC[C@H](O)CO)OC(=O)CCCC\C=C/CCCCCCCCC
ACDLabs 10.04
O=C(OC(COP(=O)(OCC(O)CO)O)COC(=O)CCCCCC/C=C/CCCCCCCCC)CCCC\C=C/CCCCCCCCC
OpenEye OEToolkits 1.5.0
CCCCCCCCCC=CCCCCCCC(=O)OC[C@@H](CO[P@](=O)(O)OC[C@@H](CO)O)OC(=O)CCCCC=CCCCCCCCCC
CACTVS 3.341
CCCCCCCCCC=CCCCCCCC(=O)OC[CH](CO[P](O)(=O)OC[CH](O)CO)OC(=O)CCCCC=CCCCCCCCCC
Formula
C40 H75 O10 P
Name
(2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE
ChEMBL
DrugBank
ZINC
ZINC000098209291
PDB chain
8exr Chain B Residue 702 [
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Receptor-Ligand Complex Structure
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PDB
8exr
Structural basis of broad-spectrum beta-lactam resistance in Staphylococcus aureus.
Resolution
3.8 Å
Binding residue
(original residue number in PDB)
L17 Y24 K236
Binding residue
(residue number reindexed from 1)
L17 Y24 K194
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0008658
penicillin binding
Biological Process
GO:0071555
cell wall organization
Cellular Component
GO:0005886
plasma membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8exr
,
PDBe:8exr
,
PDBj:8exr
PDBsum
8exr
PubMed
36599987
UniProt
P18357
|BLAR_STAAU Regulatory protein BlaR1 (Gene Name=blaR1)
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