Structure of PDB 8e0f Chain B Binding Site BS02
Receptor Information
>8e0f Chain B (length=454) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NPVMILNELRPGLKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLA
KARAAQSALAAIFNLHLDQTPSRQPIPSEGLQLHLPQVLADAVSRLVLGK
FGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCINGEYMS
DRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQKRSIFQKSERGGF
RLKENVQFHLYISTSPCGDARIFSPHEPIARGQLRTKIESGQGTIPVRSN
ASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSII
LGSLYHGDHLSRAMYQRISNIEDLPPLYTLNKPLLSGISNAEARQPGKAP
NFSVNWTVGDSAIEVINATTGKDELGRASRLCKHALYCRWMRVHGKVPSH
LLRSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQ
FSLT
Ligand information
>8e0f Chain D (length=32) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cguagcuaucagagccccccggcaucgcgagc
................................
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8e0f
ADAR activation by inducing a syn conformation at guanosine adjacent to an editing site.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
N235 N241 S258
Binding residue
(residue number reindexed from 1)
N1 N7 S24
Enzymatic activity
Enzyme Commision number
3.5.4.37
: double-stranded RNA adenine deaminase.
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0004000
adenosine deaminase activity
Biological Process
GO:0006396
RNA processing
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8e0f
,
PDBe:8e0f
,
PDBj:8e0f
PDBsum
8e0f
PubMed
36243986
UniProt
P78563
|RED1_HUMAN Double-stranded RNA-specific editase 1 (Gene Name=ADARB1)
[
Back to BioLiP
]