Structure of PDB 8d9i Chain B Binding Site BS02

Receptor Information
>8d9i Chain B (length=1256) Species: 237368 (Candidatus Scalindua brodae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNITVELTFFEPYRLVEWFDWDARKKSHSAMRGQAFAQWTWKGKGRTAGK
SFITGTLVRSAVIKAVEELLSLNNGKWEGVPCCNGSFQTDESKGKKPSFL
RKRHTLQWQANNKNICDKEEACPFCILLGRFDNAGKVHERNKDYDIHFSN
FDLDHKQEKNDLRLVDIASGRILNRVDFDTGKAKDYFRTWEADYETYGTY
TGRITLRNEHAKKLLLASLGFVDKLCGALCRIEVIKKEVLSEDHNDELRK
QAEVIVEAFKQNDKLEKIRILADAIRTLRLHGEGVIEKDELPDGKEERDK
GHHLWDIKVQGTALRTKLKELWQSNKDIGWRKFTEMLGSNLYLIYKKETG
IETKEWIIVGRLKAATPFYFGVQQPSDSIPGVINEHTSFNILLDKENRYR
IPRSALRGALRRDLRTAFGSGCNVSLGGQILCNCKVCIEMRRITLKDSVS
DFSEPPEIRYRIAKNPGTATVEDGSLFDIEVGPEGLTFPFVLRYRGHKFP
EQLSSVIRYWEENDGKNGMAWLGGLDSTGKGRFALKDIKIFEWDLNQKIN
EYIKERGMRGKEKELLEMGESSLPDGLIPYKFFEERECLFPYKENLKPQW
SEVQYTIEVGSPLLTADTISALTEPGNRDAIAYKKRVYNDGNNAIEPEPR
FAVKSETHRGIFRTAVGRRTGDLGKEDHEDCTCDMCIIFGNEHESSKIRF
EDLELINGNEFEKLEKHIDHVAIDRFTGGALDKAKFDTYPLAGSPKKPLK
LKGRFWIKKGFSGDHKLLITTALSDIRDGLYPLGSKGGVGYGWVAGISID
DNVPDDFKEMINKTEAAAAAAAAAAAAAAAAAAAKNKNIYYPHYFLDSGS
KVYREKDIITHEEFTEELLSGKINCKLETLTPLIIPDTSDENGLKLQGNK
PGHKNYKFFNINGELMIPGSELRGMLRTHFEALTKSCFAIFGEDSTLSWR
RKCASKTLGGKLDKALHPCTGLSDGLCPGCHLFGTTDYKGRVKFGFAKYE
NGPEWLITRGNNPERSLTLGVLESPRPAFSIPDDESEIPGRKFYLHHNGW
RIIRQKQLEIRETVQPERNVTTEVMDKGNVFSFDVKFENLREWELGLLLQ
SLDPGKNIAHKLGKGKPYGFGSVKIKIDSLHTFKINSNNDKIKRVPQSDI
REYINKGYQKLIEWSGNNSIQKGNVLPQWHVIPHIDKLYKLLWVPFLNDS
KLEPDVRYPVLNEESKGYIEGSDYTYKKLGDKDNLPYKTRVKGLTTPWSP
WNPFQV
Ligand information
>8d9i Chain C (length=35) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acuuaaugucacgguacccaauuuucugccccgga
...................................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8d9i Craspase is a CRISPR RNA-guided, RNA-activated protease.
Resolution3.62 Å
Binding residue
(original residue number in PDB)		R32 Q34 F36 F52 T56 L57 R59 S60 S86 F87 D90 K93 L100 R101 K102 R103 K136 V137 E139 K142 Y144 I146 H147 F148 N150 I172 L173 N174 V176 D185 Y186 F187 G426 R467 S468 R471 R475 L490 L495 T508 L509 Y524 R525 I526 K528 V535 F541 L589 D590 S591 A680 K718 T721 R723 I725 T728 G754 D783 H784 V785 I787 G792 K799 S849 T969 S1001 E1002 R1004 G1005 R1008 T1422 K1426 V1458 E1460 S1461 P1462 R1463 Y1481 K1553
Binding residue
(residue number reindexed from 1)		R32 Q34 F36 F52 T56 L57 R59 S60 S86 F87 D90 K93 L100 R101 K102 R103 K136 V137 E139 K142 Y144 I146 H147 F148 N150 I172 L173 N174 V176 D185 Y186 F187 G371 R403 S404 R407 R411 L426 L431 T444 L445 Y460 R461 I462 K464 V471 F477 L525 D526 S527 A616 K654 T657 R659 I661 T664 G690 D719 H720 V721 I723 G728 K735 S785 T888 S920 E921 R923 G924 R927 T985 K989 V1021 E1023 S1024 P1025 R1026 Y1044 K1116
Enzymatic activity
Enzyme Commision number ?
External links