Structure of PDB 8d9g Chain B Binding Site BS02

Receptor Information
>8d9g Chain B (length=1286) Species: 237368 (Candidatus Scalindua brodae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNITVELTFFEPYRLVEWFDWDARKKSHSAMRGQAFAQWTWKGKGRTAGK
SFITGTLVRSAVIKAVEELLSLNNGKWEGVPCCNGSFQTDESKGKKPSFL
RKRHTLQWQANNKNICDKEEACPFCILLGRFDNAGKVHERNKDYDIHFSN
FDLDHKQEKNDLRLVDIASGRILNRVDFDTGKAKDYFRTWEADYETYGTY
TGRITLRNEHAKKLLLASLGFVDKLCGALCRIEVIKDHNDELRKQAEVIV
EAFKQNDKLEKIRILADAIRTLRLHGEGVIEKDELPDGKEERDKGHHLWD
IKVQGTALRTKLKELWQSNKDIGWRKFTEMLGSNLYLIYKKETGGVSTRF
RILGDTEYYSKAHDSEGSDLFIPVTPPEGIETKEWIIVGRLKAATPFYFG
VQQPSDSIPGKEKKSEDSLVINEHTSFNILLDKENRYRIPRSALRGALRR
DLRTAFGSGCNVSLGGQILCNCKVCIEMRRITLKDSVSDFSEPPEIRYRI
AKNPGTATVEDGSLFDIEVGPEGLTFPFVLRYRGHKFPEQLSSVIRYWEE
NDGKNGMAWLGGLDSTGKGRFALKDIKIFEWDLNQKINEYIKERGMRGKE
KELLEMGESSLPDGLIPYKFFEERECLFPYKENLKPQWSEVQYTIEVGSP
LLTADTISALTEPGNRDAIAYKKRVYNDGNNAIEPEPRFAVKSETHRGIF
RTAVGRRTGDLGKEDHEDCTCDMCIIFGNEHESSKIRFEDLELINGNEFE
KLEKHIDHVAIDRFTGGALDKAKFDTYPLAGSPKKPLKLKGRFWIKKGFS
GDHKLLITTALSDIRDGLYPLGSKGGVGYGWVAGISIDDNVPDDFKEMIN
KTNNDYVHPGHQSPKQDHKNKNIYYPHYFLDSGSKVYREKDIITHEEFTE
ELLSGKINCKLETLTPLIIPDTSDENGLKLQGNKPGHKNYKFFNINGELM
IPGSELRGMLRTHFEALTKSCFAIFGEDSTLSWASKTLGGKLDKALHPCT
GLSDGLCPGCHLFGTTDYKGRVKFGFAKYENGPEWLITRGNNPERSLTLG
VLESPRPAFSIPDDESEIPGRKFYLHHNGWRIIRQKQLEIRETVQPERNV
TTEVMDKGNVFSFDVRFENLREWELGLLLQSLDPGKNIAHKLGKGKPYGF
GSVKIKIDSLHTFKINSNNDKIKRVPQSDIREYINKGYQKLIEWSGNNSI
QKGNVLPQWHVIPHIDKLYKLLWVPFLNDSKLEPDVRYPVLNEESKGYIE
GSDYTYKKLGDKDNLPYKTRVKGLTTPWSPWNPFQV
Ligand information
>8d9g Chain D (length=23) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uccggggcagaaaauuggacgau
.......................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8d9g Craspase is a CRISPR RNA-guided, RNA-activated protease.
Resolution2.57 Å
Binding residue
(original residue number in PDB)		K182 K184 K287 R289 R318 H323 Y362 K366 R377 D537 G538 L540 E743 H757 D796 K797 K799 F800 T1418 L1454 E1455 S1456 R1500
Binding residue
(residue number reindexed from 1)		K182 K184 K261 R263 R292 H297 Y336 K340 R351 D511 G512 L514 E717 H731 D770 K771 K773 F774 T1016 L1052 E1053 S1054 R1098
Enzymatic activity
Enzyme Commision number ?
External links