Structure of PDB 8coy Chain B Binding Site BS02

Receptor Information
>8coy Chain B (length=337) Species: 5855 (Plasmodium vivax) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GYKFNDEYRNLQWGLDLARLDETQDLINANRVSVTKICVIDSGIDYNHPD
LRNNIDVNVKELHGRKGVDDDSNGVVDDVYGANFVSNSGDPMDDNYHGTH
VSGIISAVGNNGIGIVGVDGHSKLVICKALDQHKLGRLGDMFKCIDYCIS
RQAHMISGSFSFDEYSNIFSASVEHLRSLGILFFVSASNCAHDDIAKCDL
AVNHRYPPILSKTHNNVIAVANLKRDLDESYSLSVNSFYSNIYCQLAAPG
TNIYSTTPMNNYRKLNGTSMASPHVAAIASIVRSINPNLTYLQIVEILRN
AIVKLPSLTERVSWGGYVDILRAVNLAIDSKAAPYIK
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8coy Chain B Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8coy 3D structures of the Plasmodium vivax subtilisin-like drug target SUB1 reveal conformational changes to accommodate a substrate-derived alpha-ketoamide inhibitor.
Resolution1.507 Å
Binding residue
(original residue number in PDB)		D281 D325 V383 N386 I388 I390
Binding residue
(residue number reindexed from 1)		D6 D50 V108 N111 I113 I115
Annotation score4
Enzymatic activity
Enzyme Commision number 3.4.21.62: subtilisin.
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:8coy, PDBe:8coy, PDBj:8coy
PDBsum8coy
PubMed37428845
UniProtE6Y8B9

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