Structure of PDB 8cj7 Chain B Binding Site BS02
Receptor Information
>8cj7 Chain B (length=352) Species:
7955
(Danio rerio) [
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PITGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIPA
RLATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTC
ALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAAL
TARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGA
FFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAR
EFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLIIL
EGGYNLTSISESMSMCTSMLLGDSPPTPLKTSATVSINNVLRAHAPFWSS
LR
Ligand information
Ligand ID
UTO
InChI
InChI=1S/C13H12N8O/c14-17-13(22)9-4-5-10(16-7-9)8-21-19-12(18-20-21)11-3-1-2-6-15-11/h1-7H,8,14H2,(H,17,22)
InChIKey
IWWAKCDINOGSFB-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
c1ccnc(c1)c2nnn(n2)Cc3ccc(cn3)C(=O)NN
CACTVS 3.385
NNC(=O)c1ccc(Cn2nnc(n2)c3ccccn3)nc1
Formula
C13 H12 N8 O
Name
6-[(5-pyridin-2-yl-1,2$l^{4},3,4-tetrazacyclopenta-1,3-dien-2-yl)methyl]pyridine-3-carbohydrazide
ChEMBL
DrugBank
ZINC
PDB chain
8cj7 Chain B Residue 804 [
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Receptor-Ligand Complex Structure
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PDB
8cj7
Selective and Bioavailable HDAC6 2-(Difluoromethyl)-1,3,4-oxadiazole Substrate Inhibitors and Modeling of Their Bioactivation Mechanism.
Resolution
1.51 Å
Binding residue
(original residue number in PDB)
H463 S531 H574 G582 F583 H614 F643 Y745
Binding residue
(residue number reindexed from 1)
H22 S90 H133 G141 F142 H173 F202 Y304
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8cj7
,
PDBe:8cj7
,
PDBj:8cj7
PDBsum
8cj7
PubMed
37797307
UniProt
F8W4B7
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