Structure of PDB 7vpf Chain B Binding Site BS02

Receptor Information
>7vpf Chain B (length=273) Species: 1920421 (Paenibacillus sp. FSL H7-0331) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MERFTNIDRLSLNQITTNSWSLREAAEGCVRAEIPWIALWRNKVEEAGLA
ESKRIVRDAGLKVSSLCRGGMFPAATAAERAARIDDNRRAIDEAAELEAE
VLVLVCGPAPDRDIDGARQMVEVAIHELVPYAQERGVTLGIEPLHPMYAA
ERSVISTLAQATTIAERFTPQQVGVVVDVFHVWWDPELYKQIARASGRIL
GFHVSDWIVPTPDMLLGRGMMGDGVIELNRIRQAVEAAGYRGPIEVEIFN
QAIWDRPGDEVLAEMKARYLEHV
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain7vpf Chain B Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7vpf Crystal structure of a novel putative sugar isomerase from the psychrophilic bacterium Paenibacillus sp. R4.
Resolution2.983 Å
Binding residue
(original residue number in PDB)
E142 H203 E247
Binding residue
(residue number reindexed from 1)
E142 H203 E247
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016853 isomerase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:7vpf, PDBe:7vpf, PDBj:7vpf
PDBsum7vpf
PubMed34784551
UniProtA0A1R1C9D1

[Back to BioLiP]