Structure of PDB 7ux8 Chain B Binding Site BS02

Receptor Information

>7ux8 Chain B (length=361) Species: 202862 (Streptomyces drozdowiczii)

NVSLVDESLLVGVTDEDRAVRSAHQFYERLIGLWAPAVMEAAHELGVFAA
LAEAPADSGELARRLDCDARAMRVLLDALYAYDVIDRIHDTNGFRYLLSA
EARECLLPGTLFSLVGKFMHDINVAWPAWRNLAEVVRHGARDTSGAESPN
GIAQEDYESLVGGINFWAPPIVTTLSRKLRASGRSGDATASVLDVGCGTG
LYSQLLLREFPRWTATGLDVERIATLANAQALRLGVEERFATRAGDFWRG
GWGTGYDLVLFANIFHLQTPASAVRLMRHAAACLAPDGLVAVVDQIVDAD
REPKTPQDRFALLFAASMTNTGGGDAYTFQEYEEWFTAAGLQRIETLDTP
MHRILLARRAT

Ligand information

• Ligand ID: SAH
• InChI: InChI=1S/C14H20N6O5S/c15-6(14(23)24)1-2-26-3-7-9(21)10(22)13(25-7)20-5-19-8-11(16)17-4-18-12(8)20/h4-7,9-10,13,21-22H,1-3,15H2,(H,23,24)(H2,16,17,18)/t6-,7+,9+,10+,13+/m0/s1
• InChIKey: ZJUKTBDSGOFHSH-WFMPWKQPSA-N
• SMILES:
  CACTVS 3.341: N[CH](CCSC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)C(O)=O
  OpenEye OEToolkits 1.5.0: c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CSCCC(C(=O)O)N)O)O)N
  CACTVS 3.341: N[C@@H](CCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)C(O)=O
  ACDLabs 10.04: O=C(O)C(N)CCSCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
  OpenEye OEToolkits 1.5.0: c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSCC[C@@H](C(=O)O)N)O)O)N
• Formula: C14 H20 N6 O5 S
• Name: S-ADENOSYL-L-HOMOCYSTEINE
• ChEMBL: CHEMBL418052
• DrugBank: DB01752
• ZINC: ZINC000004228232
• PDB chain: 7ux8 Chain B Residue 401

Receptor-Ligand Complex Structure

Structure summary

• PDB: 7ux8 Expanding the eukaryotic genetic code with a biosynthesized 21st amino acid.
• Resolution: 1.4 Å
• Binding residue (original residue number in PDB): Y162 G201 C202 G203 Y207 D224 D251 F252 A267 N268 I269
• Binding residue (residue number reindexed from 1): Y157 G196 C197 G198 Y202 D219 D246 F247 A262 N263 I264
• Annotation score: 4

Gene Ontology

Molecular Function

• GO:0008168 methyltransferase activity
• GO:0008171 O-methyltransferase activity

External links

• PDB: RCSB:7ux8, PDBe:7ux8, PDBj:7ux8
• PDBsum: 7ux8
• PubMed: 36173166
• UniProt: A0A0D4WTP2