Structure of PDB 7u7h Chain B Binding Site BS02

Receptor Information
>7u7h Chain B (length=423) Species: 679935 (Alistipes finegoldii DSM 17242) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MVDIFARLEKNAGGPIGQYMSYAHGYFAFPKLEGEIGPHMVFRGKKMLNW
SLNNYLGLANHPEVRKADAEGAAKFGMAAPMGARMMSGQTVYHEQLEREL
AEFVGKEDAFLLNFGYQGMISIIDCLLTPRDVVVYDAEAHACIIDGLRLH
KGKRFVYGHNDMDSLRLQLQHATDLAEEQKGGVLVITEGVFGMKGDLGKL
DEIVALKKDFQFRLLVDDAHGFGTMGEGGRGTASHFGVTDGVDVLFNTFA
KSMAGIGAFVCGPRWLVNLLRYNMRSQLYAKSLPMPMVMGALKRLELIRN
HPEYQQKLWEIVRALQNGLKENGFEIGVTNSPVTPVFMKGGIPEATNLIV
DLRENHGIFCSIVIYPVIPKGEIILRVIPTAAHTLDDVNYTIAAFKSVRD
KLEGGIYAQMPIPVRADEGFKVR
Ligand information
Ligand IDPLP
InChIInChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)
InChIKeyNGVDGCNFYWLIFO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341Cc1ncc(CO[P](O)(O)=O)c(C=O)c1O
OpenEye OEToolkits 1.5.0Cc1c(c(c(cn1)COP(=O)(O)O)C=O)O
ACDLabs 10.04O=P(O)(O)OCc1cnc(c(O)c1C=O)C
FormulaC8 H10 N O6 P
NamePYRIDOXAL-5'-PHOSPHATE;
VITAMIN B6 Phosphate
ChEMBLCHEMBL82202
DrugBankDB00114
ZINCZINC000001532514
PDB chain7u7h Chain B Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7u7h Biochemical characterization of the first step in sulfonolipid biosynthesis in Alistipes finegoldii.
Resolution2.9 Å
Binding residue
(original residue number in PDB)
F114 G115 H140 C142 D217 A219 T248 K251
Binding residue
(residue number reindexed from 1)
F114 G115 H140 C142 D217 A219 T248 K251
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0030170 pyridoxal phosphate binding
Biological Process
GO:0009058 biosynthetic process

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Molecular Function

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Biological Process
External links
PDB RCSB:7u7h, PDBe:7u7h, PDBj:7u7h
PDBsum7u7h
PubMed35760102
UniProtI3YKQ4

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