Structure of PDB 7u7h Chain B Binding Site BS02
Receptor Information
>7u7h Chain B (length=423) Species:
679935
(Alistipes finegoldii DSM 17242) [
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MVDIFARLEKNAGGPIGQYMSYAHGYFAFPKLEGEIGPHMVFRGKKMLNW
SLNNYLGLANHPEVRKADAEGAAKFGMAAPMGARMMSGQTVYHEQLEREL
AEFVGKEDAFLLNFGYQGMISIIDCLLTPRDVVVYDAEAHACIIDGLRLH
KGKRFVYGHNDMDSLRLQLQHATDLAEEQKGGVLVITEGVFGMKGDLGKL
DEIVALKKDFQFRLLVDDAHGFGTMGEGGRGTASHFGVTDGVDVLFNTFA
KSMAGIGAFVCGPRWLVNLLRYNMRSQLYAKSLPMPMVMGALKRLELIRN
HPEYQQKLWEIVRALQNGLKENGFEIGVTNSPVTPVFMKGGIPEATNLIV
DLRENHGIFCSIVIYPVIPKGEIILRVIPTAAHTLDDVNYTIAAFKSVRD
KLEGGIYAQMPIPVRADEGFKVR
Ligand information
Ligand ID
PLP
InChI
InChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)
InChIKey
NGVDGCNFYWLIFO-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
Cc1ncc(CO[P](O)(O)=O)c(C=O)c1O
OpenEye OEToolkits 1.5.0
Cc1c(c(c(cn1)COP(=O)(O)O)C=O)O
ACDLabs 10.04
O=P(O)(O)OCc1cnc(c(O)c1C=O)C
Formula
C8 H10 N O6 P
Name
PYRIDOXAL-5'-PHOSPHATE;
VITAMIN B6 Phosphate
ChEMBL
CHEMBL82202
DrugBank
DB00114
ZINC
ZINC000001532514
PDB chain
7u7h Chain B Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
7u7h
Biochemical characterization of the first step in sulfonolipid biosynthesis in Alistipes finegoldii.
Resolution
2.9 Å
Binding residue
(original residue number in PDB)
F114 G115 H140 C142 D217 A219 T248 K251
Binding residue
(residue number reindexed from 1)
F114 G115 H140 C142 D217 A219 T248 K251
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0016740
transferase activity
GO:0030170
pyridoxal phosphate binding
Biological Process
GO:0009058
biosynthetic process
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:7u7h
,
PDBe:7u7h
,
PDBj:7u7h
PDBsum
7u7h
PubMed
35760102
UniProt
I3YKQ4
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