Structure of PDB 7nf8 Chain B Binding Site BS02

Receptor Information
>7nf8 Chain B (length=455) Species: 9940 (Ovis aries) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ELGLFSGTCIIVGTIIGSGIFISPKSVLSNMEAVGPCLIIWAMCGVLATL
GALCFAELGTMITKSGGEYPYLMEAFGPIPAYLFSWSSLFVIKPSSFAII
CLSFSEYVCAPFYSGCSPPQVVIKTLAAAAILLISTVNALSVRLGSYVQN
VFTAAKMVIVVIIIISGLVLLAQGNTRNFENSFEGASLSVGSISLALYNG
LWAYDGWNQLNYITEELRNPFRNLPLAIIIGIPLVTGCYILMNVSYFTVM
TATELLQSQAVAVTFGDRVLYPASWIVPLFVAFSTIGAANGSCFTAGRLV
FVAGREGHMLKVLSYISVKRLTPAPAIMFHSMIAIIYIIPGDINSLVNYF
SFAAWLFYGLTITGLIVMRFTRKELKRPIKVPIFIPILVTLLSVFLVLAP
IISAPAWEYLYCVLFMLSGLVFYFLFVHYKFGWAQKISKPLTMHLQMLME
VVPPE
Ligand information
Ligand IDLBN
InChIInChI=1S/C42H82NO8P/c1-6-8-10-12-14-16-18-20-21-23-25-27-29-31-33-35-42(45)51-40(39-50-52(46,47)49-37-36-43(3,4)5)38-48-41(44)34-32-30-28-26-24-22-19-17-15-13-11-9-7-2/h20-21,40H,6-19,22-39H2,1-5H3/b21-20-/t40-/m1/s1
InChIKeyWTJKGGKOPKCXLL-VYOBOKEXSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)([O-])OCC[N+](C)(C)C)OC(=O)CCCCCCCC=CCCCCCCCC
OpenEye OEToolkits 2.0.7CCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)([O-])OCC[N+](C)(C)C)OC(=O)CCCCCCC/C=C\CCCCCCCC
CACTVS 3.385CCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P]([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCC\C=C/CCCCCCCC
CACTVS 3.385CCCCCCCCCCCCCCCC(=O)OC[CH](CO[P]([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCC=CCCCCCCCC
ACDLabs 12.01C(C(COC(CCCCCCCCCCCCCCC)=O)OC(CCCCCCCC=[C@H]CCCCCCCC)=O)OP(OCC[N+](C)(C)C)([O-])=O
FormulaC42 H82 N O8 P
Name1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine;
(2R)-2-[(9Z)-9-Octadecenoyloxy]-3-(palmitoyloxy)propyl 2-(trimethylammonio)ethyl phosphate
ChEMBL
DrugBank
ZINC
PDB chain7nf8 Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7nf8 Ca 2+ -mediated higher-order assembly of heterodimers in amino acid transport system b 0,+ biogenesis and cystinuria.
Resolution2.83 Å
Binding residue
(original residue number in PDB)
V136 F140 F311
Binding residue
(residue number reindexed from 1)
V108 F112 F283
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0015175 neutral L-amino acid transmembrane transporter activity
GO:0015184 L-cystine transmembrane transporter activity
GO:0015297 antiporter activity
GO:0022857 transmembrane transporter activity
GO:0046982 protein heterodimerization activity
GO:0180009 broad specificity neutral L-amino acid:basic L-amino acid antiporter activity
Biological Process
GO:0003333 amino acid transmembrane transport
GO:0015804 neutral amino acid transport
GO:0015811 L-cystine transport
GO:0055085 transmembrane transport
GO:1990822 basic amino acid transmembrane transport
Cellular Component
GO:0016020 membrane
GO:0016324 apical plasma membrane
GO:0031526 brush border membrane

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7nf8, PDBe:7nf8, PDBj:7nf8
PDBsum7nf8
PubMed35577790
UniProtA0A6P3EL78

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