Structure of PDB 7lvv Chain B Binding Site BS02

Receptor Information
>7lvv Chain B (length=1012) Species: 980427 (Deinococcus wulumuqiensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SLQLVKKFQKRLEDIVAYGGTRNESSVRAAFQQLLSDWAEGSGLRLITEV
TQKAVAGNNVRPDGTLKDSLQQSRGYWESKDEADTLDDEIQKKLAKGYPR
DNIIFEDSRLAVLMQNGEEVQRVDMGDAGALAGLLKLFFEFEPPQVLEFR
KAVDHFKDEMPHLLKILREAADAAEQKADYRGERDHFVEIAKEAINPDFS
PRDAREMLIQHILTGDLFTSVFDNAQYHEDNNIAQQLQQLAATFYKGPVK
RDIAERTKRYYGAIQAAAAQIADHHEKQRFLKALYENFYRAYNPAGAERL
GIFYTPGEIVRFMIEATDTLLEKHFQKELADKGVEILDPATGTGTFITEL
IDFLPKAKLEQKYREELHCNELALLPYYIANLNIEATYAQKMGRYEEFRN
IVLVDTLDNTGGLFGSVTAENLERAKRQNARPVRVIIGNPPYRANQANEN
DNNKNREYKEIDRRIKATYVAASTAQKTKLYDMYSRFLRWATDRLKEDGI
VAFVSNSSFIDSRTFDGFRKEVVKDFDHIYILDMKGNANTSGERRKREGG
NVFNDQIKVGVAVYFLVRSDTKIWYHAVPDFWRAREKLEWLKTTKFEDIE
FDHIRPDAKHNWLGQVDEENDWNEFLPVADKDTKQAKGLGQERAIFKLYS
LGVVTNRDEWVYSRAEDELADKVRYFIGRYNEIIKLPLGDLMSRNWEGDI
KMTRATIADAQSRKSYSLEKNSIVPSLYRPFDVLKMYFSKNLNEMQYQMP
SIFPKGVGENVVIALSGSPAAKPFQVLATDILPSLDLLEKTQCLPFYRYT
MNGERLNNITDYALKAFQTHYADTSISREDIFHYVYAVLHHPAYREKYAL
NLRQEFPRIPFYPEFGRWAAWGRELMALHIGFESVAPYPLKRTDEPPKND
TPEALALAKKARLKVQRDAAKQPTGAVELDGLTTLAGIPAAAWAYKLGNR
SALEWVLERHKETTPKDATIREKFNTYRFADHKERVIDLLARVTTVSVET
VRIVGEMPAETM
Ligand information
Receptor-Ligand Complex Structure
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PDB7lvv Coordination of phage genome degradation versus host genome protection by a bifunctional restriction-modification enzyme visualized by CryoEM.
Resolution3.25 Å
Binding residue
(original residue number in PDB)		G302 F304 N448 P450 Y451 A484 Q485 K486 K488 N515 S517 R522 T523 F562 Q565 I566 K567 V568 L668 M762 Y764 Q765 P786 K807
Binding residue
(residue number reindexed from 1)		G301 F303 N439 P441 Y442 A475 Q476 K477 K479 N506 S508 R513 T514 F553 Q556 I557 K558 V559 L651 M745 Y747 Q748 P769 K790
Enzymatic activity
Enzyme Commision number 2.1.1.72: site-specific DNA-methyltransferase (adenine-specific).
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0004519 endonuclease activity
GO:0008168 methyltransferase activity
GO:0008170 N-methyltransferase activity
GO:0009007 site-specific DNA-methyltransferase (adenine-specific) activity
Biological Process
GO:0009307 DNA restriction-modification system
GO:0032259 methylation

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7lvv, PDBe:7lvv, PDBj:7lvv
PDBsum7lvv
PubMed33826880
UniProtA0A345IJ72

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