Structure of PDB 7lm3 Chain B Binding Site BS02
Receptor Information
>7lm3 Chain B (length=186) Species:
284812
(Schizosaccharomyces pombe 972h-) [
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FKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLETCGILCGKLRQ
NAFFITHLVIPLQEATSDACGTTDEASLFEFQDKHNLLTLGWIHTHPTQT
CFMSSVDLHTHCSYQLMLPEAIAIVMAPSKNTSGIFRLLDPEGLQTIVKC
RKPGLFHPHEGKVYTMVAQPGHVREINSKLQVVDLR
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
7lm3 Chain B Residue 502 [
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Receptor-Ligand Complex Structure
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PDB
7lm3
Crystal structure of the Thr316Ala mutant of a yeast JAMM deubiquitinase: implication of active-site loop dynamics in catalysis.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
H341 H343 D354
Binding residue
(residue number reindexed from 1)
H94 H96 D107
Annotation score
4
Enzymatic activity
Enzyme Commision number
3.4.19.-
Gene Ontology
Molecular Function
GO:0008233
peptidase activity
GO:0008237
metallopeptidase activity
GO:0061578
K63-linked deubiquitinase activity
GO:0140492
metal-dependent deubiquitinase activity
Biological Process
GO:0016579
protein deubiquitination
GO:0070536
protein K63-linked deubiquitination
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:7lm3
,
PDBe:7lm3
,
PDBj:7lm3
PDBsum
7lm3
PubMed
34100774
UniProt
Q9P371
|SST2_SCHPO AMSH-like protease sst2 (Gene Name=sst2)
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