Structure of PDB 7kn8 Chain B Binding Site BS02

Receptor Information
>7kn8 Chain B (length=708) Species: 190485 (Xanthomonas campestris pv. campestris str. ATCC 33913) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPYQWRSVAIGGGGFVTGVLFHPAERGLAYARTDVGGAYRWDAQAQQWTA
LTDWLGADDWNLMGIDAFAVDPADADALYLAAGTYMHERAGNAAVLRSFN
RGRTFERADLPFKLGGNQLGRANGERLAVDPHDGRVLLLGSRDAGLWRSD
DRGAHWAKVASFPDAALAGATARNHVGREQAVGIAFVVFDAASGNTGTPT
PRIYVGVSTEQTSLYVSEDAGRSWAPVAGQPRGLRPSHMAGGSDGHWYLS
YGDQPGPDLMAGGALWKFTPAQGRWREISPIPQPASGDGFGWGAVAVDPQ
QPQVLLASTFRRRTPRDELYRSVDGGKHWAPLLADAVFDHSAAPWTAHAT
PHWMGALAIDPFDGNHALFVTGYGIWASRNLQDFAAPQRPLQWWFQDRGL
EETVPLDLLSPMAGAHLLSALGDIDGFRHDELDRAQLQYAGPRLTNGESI
DAAGQAPQWVVRSGTVRDRRNNEIRALYSRDGGKQWTAFASEPPAGQGAG
SIAIGADAAQVVWAPERGGNWRTSDFGAQWQRVDGLPDTAVVMADRVDAR
RWYAVDVASGQLYESTDAARSFRATGVQVGSPARDERTRPQLRPDPWRAG
VVYLASPGKGVMRWQDGTLQVLSQPDEARSLGIGKALRAGAPPALYLAGR
VQGVDGVFRSDDGGVQWQRINDDAHRFGRPYSVTGDPRIAGRVYFATGGR
GIFYGDPR
Ligand information
Ligand IDBGC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL1614854
DrugBankDB02379
ZINCZINC000003833800
PDB chain7kn8 Chain D Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7kn8 Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Resolution1.95 Å
Binding residue
(original residue number in PDB)		H395 W396 G415 D466 R510
Binding residue
(residue number reindexed from 1)		H352 W353 G372 D423 R467
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0000272 polysaccharide catabolic process
GO:0010411 xyloglucan metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7kn8, PDBe:7kn8, PDBj:7kn8
PDBsum7kn8
PubMed
UniProtQ8P9U5

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