Structure of PDB 7edb Chain B Binding Site BS02

Receptor Information

>7edb Chain B (length=347) Species: 10679 (Peduovirus P2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MKVLVNHEQAYNVIINAINDAKKLTDYKTNNQWVSIQNVILGTHLTYRYI
LITGLLAKATDPRVNPLALQANAPVDGAYDARSLCHSVIVGKVEGPFLEG
KLGASNEPFLNKPARYMLHSSDNPVRRGNDKVLQQLSIDILHAATTQTLA
YEMLVIALYFTLQRTNRVITPNSINFDFHKIIYNIISHPCDGETCAIAAA
ISLHLLGEQRGWIIKAHPVNQAGSKEILDIDVYHDDIVFLSIEVKDKPFN
YQDVNHAVSKASASGISKVIFLKGPRATNLDIDESLAIENAATKGVSLSF
SDVMTFTTTCYALSPLLSNDRIIDFINNTLKDIRAKDSTIEYIQSIF

Ligand information

>7edb Chain F (length=12) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

cgtgagctctgc

Receptor-Ligand Complex Structure

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Structure summary

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PDB	7edb Structural analysis of EcoT38I restriction endonuclease
Resolution	2.39 Å
Binding residue (original residue number in PDB)	H44 L45 T46 S105 E107 L110 N111 K112 P113 P124 R126
Binding residue (residue number reindexed from 1)	H44 L45 T46 S105 E107 L110 N111 K112 P113 P124 R126

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0004519	endonuclease activity
GO:0046872	metal ion binding

View graph for
Molecular Function

External links

PDB	RCSB:7edb, PDBe:7edb, PDBj:7edb
PDBsum	7edb
PubMed
UniProt	Q83VS8

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