Structure of PDB 6zld Chain B Binding Site BS02
Receptor Information
>6zld Chain B (length=314) Species:
1053203
(Bacillus cereus HuA2-4) [
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MKILVTGAAGFIGSHLCQALLKNSAYHVVGIDHFIGPTPATLKTGNIQSL
ELNSRFQFIREDILNTDLSKLLQDIDVVYHLAAIPGVRTSWGKDFQPYVT
NNIMVTQQLLEACKHIKLDKFIHISTSSVYGEKSGAVSEDLLPIPLSPYG
VTKLSGEHLCHVYHKNFHIPIVILRYFTVYGPRQRPDMAFHRLIKQMLED
KPLTIFGDGTQTRDFTYIDDCIRGTVAALETKKNIIGEVINIGGKEQASI
LDIISMLEKISGKSATKNFLKSVPGEPKQTWADISKASTLLQYSPTVSLS
DGLEAEYDYIKQLY
Ligand information
Ligand ID
UGA
InChI
InChI=1S/C15H22N2O18P2/c18-5-1-2-17(15(26)16-5)12-9(22)6(19)4(32-12)3-31-36(27,28)35-37(29,30)34-14-10(23)7(20)8(21)11(33-14)13(24)25/h1-2,4,6-12,14,19-23H,3H2,(H,24,25)(H,27,28)(H,29,30)(H,16,18,26)/t4-,6-,7+,8+,9-,10-,11+,12-,14-/m1/s1
InChIKey
HDYANYHVCAPMJV-LXQIFKJMSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)C3OC(OP(=O)(O)OP(=O)(O)OCC2OC(N1C(=O)NC(=O)C=C1)C(O)C2O)C(O)C(O)C3O
CACTVS 3.341
O[CH]1[CH](O)[CH](O[CH]([CH]1O)C(O)=O)O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O
OpenEye OEToolkits 1.5.0
C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)O[P@@](=O)(O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)C(=O)O)O)O)O)O)O
CACTVS 3.341
O[C@@H]1[C@@H](O)[C@H](O[C@@H]([C@H]1O)C(O)=O)O[P@@](O)(=O)O[P@@](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=CC(=O)NC3=O
OpenEye OEToolkits 1.5.0
C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OC3C(C(C(C(O3)C(=O)O)O)O)O)O)O
Formula
C15 H22 N2 O18 P2
Name
URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID;
UDP-GLUCURONIC ACID
ChEMBL
CHEMBL228057
DrugBank
DB03041
ZINC
ZINC000008215691
PDB chain
6zld Chain B Residue 802 [
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Receptor-Ligand Complex Structure
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PDB
6zld
Crystallographic snapshots of UDP-glucuronic acid 4-epimerase ligand binding, rotation, and reduction.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
P85 V87 R88 T126 S127 S128 Y149 F177 T178 R185 M188 A189 R192 T204 F206 Q211 R213 I250 E276
Binding residue
(residue number reindexed from 1)
P85 V87 R88 T126 S127 S128 Y149 F177 T178 R185 M188 A189 R192 T204 F206 Q211 R213 I250 E276
Annotation score
4
External links
PDB
RCSB:6zld
,
PDBe:6zld
,
PDBj:6zld
PDBsum
6zld
PubMed
32661196
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