Structure of PDB 6ycq Chain B Binding Site BS02

Receptor Information
>6ycq Chain B (length=343) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQ
QMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAP
VQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQ
ELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLR
GENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSV
FYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTI
VGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6ycq Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis .
Resolution1.65 Å
Binding residue
(original residue number in PDB)		T135 H136 R181 G182 Q183 T190 T191 S194
Binding residue
(residue number reindexed from 1)		T123 H124 R169 G170 Q171 T178 T179 S182
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0009725 response to hormone
Cellular Component
GO:0005634 nucleus

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6ycq, PDBe:6ycq, PDBj:6ycq
PDBsum6ycq
PubMed32929017
UniProtQ8L7G0|ARFA_ARATH Auxin response factor 1 (Gene Name=ARF1)

[Back to BioLiP]