Structure of PDB 6rxo Chain B Binding Site BS02

Receptor Information
>6rxo Chain B (length=235) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KPRVLVLTGAGISAESGIRTFRAADGLWEEHRVEDVGTPEGFDRDPELVQ
AFYNARRRQLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNCDNLHERAG
NTNVIHMHGELLKVRCSQSGQALDWTGDVTPEDKCHCCQFPAPLRPHVVW
FGEMPLGMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVEL
NLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGLK
Ligand information
>6rxo Chain D (length=8) Species: 559292 (Saccharomyces cerevisiae S288C) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
GGAKRHRK
Receptor-Ligand Complex Structure
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PDB6rxo Evolved, Selective Erasers of Distinct Lysine Acylations.
Resolution1.95 Å
Binding residue
(original residue number in PDB)		H147 V187 V188 F190 G191 E192 M193 H218 V219 Y220
Binding residue
(residue number reindexed from 1)		H108 V148 V149 F151 G152 E153 M154 H179 V180 Y181
Enzymatic activity
Enzyme Commision number 2.3.1.286: protein acetyllysine N-acetyltransferase.
Gene Ontology
Molecular Function
GO:0036054 protein-malonyllysine demalonylase activity
GO:0036055 protein-succinyllysine desuccinylase activity
GO:0070403 NAD+ binding

View graph for
Molecular Function
External links
PDB RCSB:6rxo, PDBe:6rxo, PDBj:6rxo
PDBsum6rxo
PubMed32187803
UniProtP75960|NPD_ECOLI NAD-dependent protein deacylase (Gene Name=cobB)

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