Structure of PDB 6rl0 Chain B Binding Site BS02

Receptor Information
>6rl0 Chain B (length=584) Species: 316 (Stutzerimonas stutzeri) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ESKQKIHVGPGELDDYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSA
TGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKANSR
VARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPND
GKVFDLQDENSYTMYNAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAAT
CYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLD
GRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK
LPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW
NMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK
FSKDRFLPVGPLHPENDQLIDISGDEMKLVHDGPTFAEPHDCIMARRDQI
KTKKIWDRNDPFFAPTVEMAKKDGINLDTDNKVIRDGNKVRVYMTSMAPA
FGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVSMEISPQQTSSI
TFVADKPGLHWYYCSWFCHALHMEMVGRMMVEPA
Ligand information
Ligand IDCUK
InChIInChI=1S/4Cu.2S
InChIKeyPDBAWKBNXYUXTL-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.2S1[Cu]S([Cu]1)([Cu])[Cu]
CACTVS 3.370[Cu][S]1([Cu])[Cu]S[Cu]1
FormulaCu4 S2
Name[4Cu:2S] cluster
ChEMBL
DrugBank
ZINC
PDB chain6rl0 Chain B Residue 704 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6rl0 Functional assembly of nitrous oxide reductase provides insights into copper site maturation.
Resolution1.78 Å
Binding residue
(original residue number in PDB)		H129 H130 H178 H326 H382 H433 K454 H494
Binding residue
(residue number reindexed from 1)		H75 H76 H124 H272 H328 H379 K400 H440
Annotation score1
Enzymatic activity
Enzyme Commision number 1.7.2.4: nitrous-oxide reductase.
Gene Ontology
Molecular Function
GO:0004129 cytochrome-c oxidase activity
GO:0005507 copper ion binding
GO:0005509 calcium ion binding
GO:0050304 nitrous-oxide reductase activity
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6rl0, PDBe:6rl0, PDBj:6rl0
PDBsum6rl0
PubMed31189605
UniProtP19573|NOSZ_STUST Nitrous-oxide reductase (Gene Name=nosZ)

[Back to BioLiP]