Structure of PDB 6r1b Chain B Binding Site BS02

Receptor Information
>6r1b Chain B (length=395) Species: 1773 (Mycobacterium tuberculosis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSGPIDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDEVAQK
FNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDS
LLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEFDEWG
PELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPAT
IAAGNFYRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASAR
FDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPT
NTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYA
RVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRLQVILDRQIM
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6r1b Chain B Residue 503 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6r1b Structural Basis of Glycerophosphodiester Recognition by theMycobacterium tuberculosisSubstrate-Binding Protein UgpB.
Resolution2.27 Å
Binding residue
(original residue number in PDB)
D40 D93
Binding residue
(residue number reindexed from 1)
D6 D59
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Cellular Component
GO:0005886 plasma membrane

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:6r1b, PDBe:6r1b, PDBj:6r1b
PDBsum6r1b
PubMed31433162
UniProtP71619

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