Structure of PDB 6qv0 Chain B Binding Site BS02
Receptor Information
>6qv0 Chain B (length=570) Species:
243274
(Thermotoga maritima MSB8) [
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TATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIAVVFVPR
RFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQ
RVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIM
MFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEE
DISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVN
NLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQ
MALASAERIFEILDLEEEKDDPDAVELREVRGEIEFKNVWFSYDKKKPVL
KDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRK
IKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSD
HFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDAATSN
VDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMG
KHDELIQKRGFYYELFTSQY
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
6qv0 Chain B Residue 600 [
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Receptor-Ligand Complex Structure
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PDB
6qv0
The extracellular gate shapes the energy profile of an ABC exporter.
Resolution
3.12 Å
Binding residue
(original residue number in PDB)
Y364 V370 T390 S392 G393 K394 T395 T396 Q436 H548
Binding residue
(residue number reindexed from 1)
Y343 V349 T369 S371 G372 K373 T374 T375 Q415 H527
Annotation score
5
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
GO:0042626
ATPase-coupled transmembrane transporter activity
GO:0140359
ABC-type transporter activity
Biological Process
GO:0055085
transmembrane transport
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6qv0
,
PDBe:6qv0
,
PDBj:6qv0
PDBsum
6qv0
PubMed
31113958
UniProt
Q9WYC4
|Y288_THEMA Uncharacterized ABC transporter ATP-binding protein TM_0288 (Gene Name=TM_0288)
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