Structure of PDB 6plm Chain B Binding Site BS02

Receptor Information

>6plm Chain B (length=752) Species: 272624 (Legionella pneumophila subsp. pneumophila str. Philadelphia 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

GHVKQYYFARRGETSTHDTSLPPPVKVLSGRSIPLKEIPFEATRNELVQI
YLTSIDKLIKSNKLNSIPSQQIASHYLFLRSLANSETDGIKKNQILSLAK
PLGTYLASKEPHVWKMINELIEKSEYPIIHYLKNNRAHSNFMLALIHEYH
KEPLTKNQSAFVQKFRDSSVFLFPNPIYTAWLAHSYDEDSSFNPMFRERL
STNFYHSTLTDNLLLRTEPKEVTLSSEHHYKKEKGPIDSSFRYQMSSDRL
LRIQGRTLLFSTPQNDVVAVKVQKKGEPKSTLEEEFEMADYLLKHQRRLD
VHSKLPQPLGQYSVKKSEILEISRGSLDFERFKTLIDDSKDLEVYVYKAP
QSYFTYLHDKNQDLEDLTASVKTNVHDLFVLLREGIVFPQLADIFHTHFE
DKGRYQALVQLLNVLQFQLGRIDKWQKAVEYVNLRSSGLADLGDSLPITS
LFTSSDFTKHYFSELLTGGYHPTFFDKSSGTANSLFTGKRRLFGNYLYLN
TIAEYLLVIQLTLGSYGDKVTRDMMDKPKKEAVWRELANVMFTSCAEAIH
IMTGIPQSRALTLLKQRANIEKHFRQTQFWMTPDYSKLDEDTLQMEQYSI
YSGEPEYEFTDKLVSGVGLSVDGVHQDLGGYNRESPLRELEKLLYATVTL
IEGTMQLDKEFFKQLEQVEKILSGEIKTDANSCFEAVAQLLDLARPGCHF
QKRLVLSYYEEAKLKYPSAPTDAYDSRFQVVARTNAAITIQRFWREARKN
LS

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

6plm Chain B Residue 1002 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6plm Protein polyglutamylation catalyzed by the bacterial calmodulin-dependent pseudokinase SidJ.
Resolution	2.592 Å
Binding residue (original residue number in PDB)	N534 D542
Binding residue (residue number reindexed from 1)	N433 D441
Annotation score	1

Enzymatic activity

Enzyme Commision number

6.-.-.-

External links

PDB	RCSB:6plm, PDBe:6plm, PDBj:6plm
PDBsum	6plm
PubMed	31682223
UniProt	Q5ZTK6\|SIDJ_LEGPH Calmodulin-dependent glutamylase SidJ (Gene Name=sidJ)

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