Structure of PDB 6pbd Chain B Binding Site BS02

Receptor Information
>6pbd Chain B (length=331) Species: 155892 (Caulobacter vibrioides) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FGPETIIHGDCIEQMNALPEKSVDLIFADPPYNLQLSFAAYDKFTREWLK
AARRVLKDDGAIWVIGSYHNIFRVGVAVQDLGFWILNDIVWRKSNPMPNF
KGTRFANAHETLIWASKSQNAKRYTFNYDALKMANDEVQMRSDWTIPLCT
GEERIKGADGQKAHPTQKPEALLYRVILSTTKPGDVILDPFFGVGTTGAA
AKRLGRKFIGIEREAEYLEHAKARIAKVVPIAPEDLDVMGSKRAEPRVPF
GTIVEAGLLSPGDTLYCSKGTHVAKVRPDGSITVGDLSGSIHKIGALVQS
APACNGWTYWHFKTDAGLAPIDVLRAQVRAG
Ligand information
Receptor-Ligand Complex Structure
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PDB6pbd The cell cycle-regulated DNA adenine methyltransferase CcrM opens a bubble at its DNA recognition site.
Resolution2.343 Å
Binding residue
(original residue number in PDB)		Y153 K157 V163 Q164 K267 S315 H317 N330 W332 R350
Binding residue
(residue number reindexed from 1)		Y128 K132 V138 Q139 K242 S290 H292 N305 W307 R325
Enzymatic activity
Enzyme Commision number 2.1.1.72: site-specific DNA-methyltransferase (adenine-specific).
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0008168 methyltransferase activity
GO:0008170 N-methyltransferase activity
GO:0009007 site-specific DNA-methyltransferase (adenine-specific) activity
Biological Process
GO:0006260 DNA replication
GO:0032259 methylation
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6pbd, PDBe:6pbd, PDBj:6pbd
PDBsum6pbd
PubMed31601797
UniProtP0CAW2|CCRM_CAUVC DNA methyltransferase CcrM (Gene Name=ccrMIM)

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