Structure of PDB 6oo1 Chain B Binding Site BS02
Receptor Information
>6oo1 Chain B (length=137) Species:
129555
(Amphitrite ornata) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GFKQDIATLRGDLRTYAQDIFLAFLNKYPDEKRNFKNYVGKSDQELKSMA
KFGDHTEKVFNLMMEVADRATDCVPLASDASTLVQMKQHSGLTTGNFEKL
FVALVEYMRASGQSFDSQSWDRFGKNLVSALSSAGMK
Ligand information
Ligand ID
JZ0
InChI
InChI=1S/C7H8O/c1-6-4-2-3-5-7(6)8/h2-5,8H,1H3
InChIKey
QWVGKYWNOKOFNN-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.352
OpenEye OEToolkits 1.7.0
Cc1ccccc1O
Formula
C7 H8 O
Name
o-cresol;
ortho-cresol,2-methylphenol
ChEMBL
CHEMBL46931
DrugBank
ZINC
ZINC000000901022
PDB chain
6oo1 Chain B Residue 404 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6oo1
The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants.
Resolution
1.602 Å
Binding residue
(original residue number in PDB)
F21 F35 T56 V59
Binding residue
(residue number reindexed from 1)
F21 F35 T56 V59
Annotation score
1
Binding affinity
MOAD
: Kd=4594uM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004601
peroxidase activity
GO:0005344
oxygen carrier activity
GO:0019825
oxygen binding
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0015671
oxygen transport
GO:0098869
cellular oxidant detoxification
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6oo1
,
PDBe:6oo1
,
PDBj:6oo1
PDBsum
6oo1
PubMed
31445024
UniProt
Q9NAV7
[
Back to BioLiP
]