Structure of PDB 6om4 Chain B Binding Site BS02

Receptor Information
>6om4 Chain B (length=344) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MDYILGRYVKIARYGSGGLVGGGGKEQYVENLVLWENIIKTAYCFITPSS
YTAALETANIPEKDFSNCFRFLKENFFIIPSEYNNNNRYSRNFLHYQSYG
ANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENT
NLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKV
PEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLYVPG
KTGCYECQKVVADLYGAEKENIDHKIKLINSRFKPATFAPVNNVAAALCA
ADVIKFIGKYSEPLSLNKRIGIWSDEIKIHSQNMGRSPVCSVCG
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6om4 Biosynthesis of the RiPP trojan horse nucleotide antibiotic microcin C is directed by theN-formyl of the peptide precursor.
Resolution1.7 Å
Binding residue
(original residue number in PDB)		I126 S212 A213 D214 N236 A237 G238 Y239 V240 V245 V264 A265 Y268 R322 G324 W326 Q335
Binding residue
(residue number reindexed from 1)		I123 S209 A210 D211 N233 A234 G235 Y236 V237 V242 V261 A262 Y265 R319 G321 W323 Q332
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004792 thiosulfate sulfurtransferase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008641 ubiquitin-like modifier activating enzyme activity
GO:0016779 nucleotidyltransferase activity
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Cellular Component
External links
PDB RCSB:6om4, PDBe:6om4, PDBj:6om4
PDBsum6om4
PubMed30881667
UniProtQ47506

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