Structure of PDB 6net Chain B Binding Site BS02
Receptor Information
>6net Chain B (length=428) Species:
441959
(Talaromyces stipitatus ATCC 10500) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
QPLSVGIVGGGIIGVILAAGLVRRGIDVKVFEQARGFREAGMAFTANAVR
CMEMLDPAIVWALRSSGAVPQAEARDYLRWVDGYHESSKRLYQLDAGIRG
FEACRRDQFLEALVKVLPEGIVECQKRLQKIHEKNETEKVTLEFADGTFA
HVDCVIGADGIRSRVRQHLFGEDSPYSHPHYSHKFAFRGLITMENAISAL
GEDKARTLNMHVGPNAHLIHYPVANETMVNIAAFVSDPEEWPKLSLVGPA
TREEAMGYFANWNPGLRAVLGFMPENIDRWAMFDTYDYPAPFFSRGKICL
VGDAAHAAVPHHGAGACIGIEDALCATVLLAEVFVSTRGKSSIVRNRAIA
AAFGSFNAVRRVRAQWFVDSSRRVCDLYQQPEWADPQKRIKAENCFEEIK
DRSHKIWHFDYNSMLQEAIEKYRHNMGS
Ligand information
Ligand ID
FAD
InChI
InChI=1S/C27H33N9O15P2/c1-10-3-12-13(4-11(10)2)35(24-18(32-12)25(42)34-27(43)33-24)5-14(37)19(39)15(38)6-48-52(44,45)51-53(46,47)49-7-16-20(40)21(41)26(50-16)36-9-31-17-22(28)29-8-30-23(17)36/h3-4,8-9,14-16,19-21,26,37-41H,5-7H2,1-2H3,(H,44,45)(H,46,47)(H2,28,29,30)(H,34,42,43)/t14-,15+,16+,19-,20+,21+,26+/m0/s1
InChIKey
VWWQXMAJTJZDQX-UYBVJOGSSA-N
SMILES
Software
SMILES
CACTVS 3.341
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO[P@](O)(=O)O[P@@](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56)c2cc1C
OpenEye OEToolkits 1.5.0
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5ncnc6N)O)O)O)O)O
OpenEye OEToolkits 1.5.0
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](CO[P@@](=O)(O)O[P@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O)O)O)O
CACTVS 3.341
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56)c2cc1C
ACDLabs 10.04
O=C2C3=Nc1cc(c(cc1N(C3=NC(=O)N2)CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC6OC(n5cnc4c(ncnc45)N)C(O)C6O)C)C
Formula
C27 H33 N9 O15 P2
Name
FLAVIN-ADENINE DINUCLEOTIDE
ChEMBL
CHEMBL1232653
DrugBank
DB03147
ZINC
ZINC000008215434
PDB chain
6net Chain B Residue 2203 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6net
Structural basis for selectivity in flavin-dependent monooxygenase-catalyzed oxidative dearomatization.
Resolution
2.25 Å
Binding residue
(original residue number in PDB)
G19 G21 I22 I23 F41 E42 Q43 M54 A55 R124 K144 L146 A176 D177 G178 R206 D322 G332 A333 G334 A335 C336
Binding residue
(residue number reindexed from 1)
G9 G11 I12 I13 F31 E32 Q33 M42 A43 R106 K126 L128 A158 D159 G160 R188 D303 G313 A314 G315 A316 C317
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.-.-.-
Gene Ontology
Molecular Function
GO:0004497
monooxygenase activity
GO:0071949
FAD binding
Biological Process
GO:0044550
secondary metabolite biosynthetic process
Cellular Component
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6net
,
PDBe:6net
,
PDBj:6net
PDBsum
6net
PubMed
31346489
UniProt
B8M9J8
|TROPB_TALSN FAD-dependent monooxygenase tropB (Gene Name=tropB)
[
Back to BioLiP
]