Structure of PDB 6m7y Chain B Binding Site BS02

Receptor Information
>6m7y Chain B (length=948) Species: 1360 (Lactococcus lactis subsp. lactis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SFKAQPFLVRNTILCPNDKRSFTEYTQVIETVSKNKVFLEQLLLANPKLY
DVMQKYNAGLLKKKRVKKLFESIYKYYKRSYLRSTPFGLFSETSIGVFSK
SSQYKLMGKTTKGIRLDTQWLIRLVHKMEVDFSKKLSFTRNNANYKFGDR
VFQVYTINSSELEECNIKYTNVYQIISEFCENDYQKYEDICETVTLCYGD
EYRELSEQYLGSLIVNHYLISNLQKDLLSDFSWNTFLTKVEAIDEDKKYI
IPLKKVQKFIQEYSEIEIGEGIEKLKEIYQEMSQILENDNYIQIDLISDS
EINFDVKQKQQLEHLAEFLGNTTKSVRRTYLDDYKDKFIEKYGVDQEVQI
TELFDSTFGIGAPYNYNHPRNDFYESEPSTLYYSEEEREKYLSMYVEAVK
NHNVINLDDLESHYQKMDLEKKSELQGLELFLNLAKEYEKDIFILGDIVG
NNNLGGASGRFSALSPELTSYHRTIVDSVERENENKEITSCEIVFLPENI
RHANVMHTSIMRRKVLPFFTSTSHNEVLLTNIYIGIDEKEKFYARDISTQ
EVLKFYITSMYNKTLFSNELRFLYEISLDDKFGNLPWELIYRDFDYIPRL
VFDEIVISPAKWKIWGRDVNSKMTIRELIQSKEIPKEFYIVNGDNKVYLS
QKNPLDMEILESAIKKSSKRKDFIELQEYFEDENIINKGEKGRVADVVVP
FIRAFIREKRVSVERREKLPFNEWLYLKLYISINRQNEFLLSYLPDIQKI
VANLGGNLFFLRYTDPKPHIRLRIKCSDLFLAYGSILEILKRSRKNRIMS
TFDISIYDQEVERYGGFDTLELSEAIFCADSKIIPNLLTLIKDTNNDWKV
DDVSILVNYLYLKCFFQNDNKKILNFLNLVFYDKNFKELKHAIKNLFLKM
IAQDFELQKVYSIIDSIIHVHNNRLIGIERDKEKLIYYTLQRLFVSEE
Ligand information
>6m7y Chain D (length=15) Species: 1358 (Lactococcus lactis) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
TKDFNLDLVCVSKTI
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6m7y Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Resolution2.794 Å
Binding residue
(original residue number in PDB)		R154 L166 E167 E168 C169 N170 I171 T174 V176 V198 Y202 L209 Y213 N220 E502
Binding residue
(residue number reindexed from 1)		R150 L162 E163 E164 C165 N166 I167 T170 V172 V194 Y198 L205 Y209 N216 E498
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005886 plasma membrane

View graph for
Cellular Component
External links
PDB RCSB:6m7y, PDBe:6m7y, PDBj:6m7y
PDBsum6m7y
PubMed31409709
UniProtP20103|NISB_LACLL Nisin biosynthesis protein NisB (Gene Name=nisB)

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