Structure of PDB 6kut Chain B Binding Site BS02

Receptor Information
>6kut Chain B (length=696) Species: 1173138 (Influenza D virus (D/swine/Oklahoma/1334/2011)) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MEINPYLLMLNNDITSMISLTYPYTGAPPMSHGTSTKYSMETVSRTYSYS
RTKKEVPSGIFPIERRKFCNTIEDKENLEKPNGNVDINFMLSLAEMLEEK
MGKGFFKFCANEAEAEILKMHFSKLTEGRQTYDWTSERNMPAATALQLTV
DAIQETQGTFKGTTMVEYCNKILEMMDWPEVKFKKVTLMITKIGREEFIK
RICTINTMAKDGERGKYKRRAIATPGMGIRPFSKIVETLAQKICERLAES
GLPEKKAKLKTTVSSTNSKLQEGQFMVNITGDNSKWNECQQPEAYLAMLA
YITKDSSNLMKDLCSVAPTLFCNKYVKMGQGFRAKNKRKTKEIVIPAKKM
KERKELMNAEWRDLFETIEPYMDGECCFLGGGMLMGMFNMLSTVFGVMTL
NYREERNCYWTGLQSSDDFVLFCISRTWPEMEMTILKFIAVCKLMGINMS
LEKSYGCLPELFEFTSMFFSGDFVSNIALELPAFTTAGMNEGTDFTAAMS
VIRTNMINNGLSPGTALMALRICLQEFRATYRVHPYDSGVKNHRMKIIRK
FIETIENKDGLLISDGGKLMNNISSLHIPEEILKEDLMDPSYRNRVFNPR
NPFTQFAVVSTHSFRTRSNRTMALEEKRYQVVCNMYRSVFESADVNTPIG
SMSMGEAIEAKILDRARTQFENGIIGGEEYSEIKRLIEDAKRQRLS
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6kut Structural insight into RNA synthesis by influenza D polymerase.
Resolution4.1 Å
Binding residue
(original residue number in PDB)		H32 G33 T34 K37 Y238 K239 R358 W386
Binding residue
(residue number reindexed from 1)		H32 G33 T34 K37 Y217 K218 R333 W361
Enzymatic activity
Enzyme Commision number 2.7.7.48: RNA-directed RNA polymerase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003723 RNA binding
GO:0003968 RNA-dependent RNA polymerase activity
GO:0034062 5'-3' RNA polymerase activity
Biological Process
GO:0001172 RNA-templated transcription
GO:0006351 DNA-templated transcription
GO:0019079 viral genome replication
GO:0039694 viral RNA genome replication

View graph for
Molecular Function
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Biological Process
External links
PDB RCSB:6kut, PDBe:6kut, PDBj:6kut
PDBsum6kut
PubMed31209309
UniProtK9LH03

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