Structure of PDB 6jnn Chain B Binding Site BS02
Receptor Information
>6jnn Chain B (length=89) Species:
3702
(Arabidopsis thaliana) [
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RNICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRT
EHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKRKTGHS
Ligand information
>6jnn Chain E (length=12) [
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caaaacagagaa
Receptor-Ligand Complex Structure
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PDB
6jnn
DNA methylation repels targeting of Arabidopsis REF6.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
W1311 Y1326 V1340 S1341 S1344 K1347 R1348
Binding residue
(residue number reindexed from 1)
W47 Y62 V76 S77 S80 K83 R84
Binding affinity
PDBbind-CN
: Kd=65.7nM
Enzymatic activity
Enzyme Commision number
1.14.11.-
External links
PDB
RCSB:6jnn
,
PDBe:6jnn
,
PDBj:6jnn
PDBsum
6jnn
PubMed
31048693
UniProt
Q9STM3
|REF6_ARATH Lysine-specific demethylase REF6 (Gene Name=REF6)
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