Structure of PDB 6hq4 Chain B Binding Site BS02

Receptor Information
>6hq4 Chain B (length=368) Species: 264462 (Bdellovibrio bacteriovorus HD100) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QSVDIHKDQIIFSEGDAGDCAYIIEKGRVLIYLTKDKEEIPLTILGEGEI
FGEMALIDNQNRSASVRALEDVRLAIVTKQQVLERVSTADKVVQLLMRVL
LKRLRSALDQIKLENQIFQAFQNKEFELFYQPIVNLKNKTITGCEALLRW
NSPQHGLVSPNLFIDIIENSSMVIPIGHWIINQALKDLRTIQDQLRLNKK
ERMADDFMMSINISGRQFTHSDFVNNLEDLREKHDLHTQNIKLEMTERIM
MDGAIAIDALNQCRSLGYAISIDDFGTGFSGLQYLTQMPISFLKIDRSFV
MKILSDPKSKAVVSSIIHLAHAMDIEVIAEGIEHHEEALVLETLGARFGQ
GYLFSKPVDLGRFLKLIK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6hq4 Chain B Residue 902 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6hq4 Nucleotide signaling pathway convergence in a cAMP-sensing bacterial c-di-GMP phosphodiesterase.
Resolution2.63 Å
Binding residue
(original residue number in PDB)		E178 N245 D306
Binding residue
(residue number reindexed from 1)		E145 N212 D273
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6hq4, PDBe:6hq4, PDBj:6hq4
PDBsum6hq4
PubMed31355487
UniProtQ6MLN6

[Back to BioLiP]