Structure of PDB 6h5l Chain B Binding Site BS02
Receptor Information
>6h5l Chain B (length=220) Species:
174633
(Candidatus Kuenenia stuttgartiensis) [
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IEIPKEVTEEGKNVYKKYCAPCHGEEGGGDGLLSRSMLPKPRNFTLGAYK
FRTTPSGSLPTDEDIYRTISYGVPNSTMIPWDILTEEQRASVVPVLKSFS
EAFEYREPEPSVDVGLPLRPTERTILAGKKIYEEKLECWKCHGVEGRGDG
PSASEQEDDFGFPIKPFDFTTGKFKGGNSPTDVYLRFTTGLNGTPMPSFA
KELSDDERWYLTHYVMSLVQ
Ligand information
Ligand ID
HEC
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKey
HXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0
CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341
C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341
CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
Formula
C34 H34 Fe N4 O4
Name
HEME C
ChEMBL
DrugBank
ZINC
PDB chain
6h5l Chain B Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
6h5l
A 60-heme reductase complex from an anammox bacterium shows an extended electron transfer pathway.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
Y52 C53 C56 H57 P73 P75 R76 F78 Y83 K84 F85 I103 V107 S110 T111 M112 W115 K209
Binding residue
(residue number reindexed from 1)
Y18 C19 C22 H23 P39 P41 R42 F44 Y49 K50 F51 I69 V73 S76 T77 M78 W81 K175
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0009055
electron transfer activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Cellular Component
GO:0044222
anammoxosome
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:6h5l
,
PDBe:6h5l
,
PDBj:6h5l
PDBsum
6h5l
PubMed
30950404
UniProt
Q1PVE1
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