Structure of PDB 6frn Chain B Binding Site BS02

Receptor Information
>6frn Chain B (length=403) Species: 2186 (Methanothermococcus thermolithotrophicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKADAVKIADGVYWVGVLDWDIRMYHGYTLNGTTYNAYLVFGDDKVALID
NTYPGTSAQMWGRIKDACEKEGREFKIDVIVQNHVEKDHSGALPEIHKKF
PEAPIYCTEVAVEGLVKHFPSLKGAPFKVVKSLESIDLGGKTLTFLEADS
MFTLYAEEGILFSNDAFGQHLCFTQRFDHEIPENILMDANQKFYANLITP
LSKLVLKKFKEVIELGLLEKIKMIAPSHGQIWTDPMKVIGAYQDFATGKC
KDKVTIVYDTMHGSTQKMAHAFAEGIMSEGVDVKMYFLHNDERSEIVKDI
LDSKAFLLGAPTIYDEPFPSVGDLIYYLKGLKFNRTGLKRLALAFGSMGG
NGGGTKVLAEKLKECGFEVLDEYELYYVPTEDELEKCYNMGKRLAVKVKE
MKT
Ligand information
Ligand IDTB
InChIInChI=1S/Tb/q+3
InChIKeyHKCRVXUAKWXBLE-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Tb+3]
FormulaTb
NameTERBIUM(III) ION
ChEMBL
DrugBank
ZINC
PDB chain6frn Chain B Residue 504 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6frn Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Resolution1.74 Å
Binding residue
(original residue number in PDB)
D88 H89 D171 H234
Binding residue
(residue number reindexed from 1)
D88 H89 D165 H228
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0009055 electron transfer activity
GO:0010181 FMN binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6frn, PDBe:6frn, PDBj:6frn
PDBsum6frn
PubMed29806881
UniProtA0A452CSW8

[Back to BioLiP]