Structure of PDB 6euh Chain B Binding Site BS02

Receptor Information
>6euh Chain B (length=345) Species: 226186 (Bacteroides thetaiotaomicron VPI-5482) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IASGKVWRDTDGNVINAHGGGILFHEGKYYWFGEHRPASGFVTEKGINCY
SSTDLYNWKSEGIALAVSEEEGHDIEKGCIMERPKVIYNAKTGKFVMWLH
LELKGQGYGPARAAVAVSDSPAGPYRFIRSGRVNPGAYPLNMTRKERKMK
WNPEEYKEWWTPKWYEAIAKGMFVKRDLKDGQMSRDMTLFVDDDGKAYHI
YSSEDNLTLQIAELADDYLSHTGKYIRIFPGGHNEAPAIFKKEGTYWMIT
SGCTGWDPNKARLLTADSMLGEWKQLPNPCVGEDADKTFGGQSTYILPLP
EKGQFFFMADMWRPKSLADSRYIWLPVQFDDKGVPFIKWMDRWNF
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain6euh Chain B Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6euh A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation.
Resolution2.0 Å
Binding residue
(original residue number in PDB)
N211 L212 T213 L214 H238 N239
Binding residue
(residue number reindexed from 1)
N206 L207 T208 L209 H233 N234
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function

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Biological Process
External links
PDB RCSB:6euh, PDBe:6euh, PDBj:6euh
PDBsum6euh
PubMed30349080
UniProtQ8A1H8

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