Structure of PDB 6djq Chain B Binding Site BS02

Receptor Information

>6djq Chain B (length=330) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

LAQPGGISDPNLIKLVNKLQDDLPQIVVVGSQSSGKSSVLENIVGRDFLP
RGQGIVTRRPLVLQLINRQSWGEFLHLPGQKFYDFNKIRDEINRETEAKV
GRNAGISPAPINLRIYSPHVLNLTLVDLPGLTRVPVGDQPRDIERQIRDM
ILKYIQKPNAIILAVTAANVDLANSDGLKLAREVDPEGQRTIGVLTKVDL
MDEGTDVVDILAGRIIPLRLGYVPVVNRGQRDIDNKKPITAALEAEKAFF
ENHKAYRNKSAYCGTPYLARKLNLILMMHIKQTLPDIKQRISSSLQKYQQ
ELEALDYTVRRRKECQQMVESLQRAAEIVS

Ligand information

Ligand ID

ALF

InChI

InChI=1S/Al.4FH/h;4*1H/q+3;;;;/p-4

InChIKey

UYOMQIYKOOHAMK-UHFFFAOYSA-J

SMILES

Software	SMILES
ACDLabs 10.04 CACTVS 3.341 OpenEye OEToolkits 1.5.0	F[Al-](F)(F)F

Formula

Al F4

Name

TETRAFLUOROALUMINATE ION

PDB chain

6djq Chain B Residue 1002 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6djq Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture.
Resolution	3.1 Å
Binding residue (original residue number in PDB)	S53 K56 V76 T77 G173
Binding residue (residue number reindexed from 1)	S33 K36 V56 T57 G130
Annotation score	1

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003924	GTPase activity
GO:0005525	GTP binding

View graph for
Molecular Function

External links

PDB	RCSB:6djq, PDBe:6djq, PDBj:6djq
PDBsum	6djq
PubMed	30087125
UniProt	G0SFF0

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