Structure of PDB 6dgd Chain B Binding Site BS02

Receptor Information
>6dgd Chain B (length=701) Species: 573 (Klebsiella pneumoniae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SVAHVALPVPLPRTFDYLLPEGMAVKAGCRVRVPFGKQERIGIVAAVSER
SELPLDELKPVAEALDDEPVFSTTVWRLLMWAAEYYHHPIGDVLFHALPV
MLRQGKPASATPLWYWFATEQGQVVDLNGLKRSRKQQQALAALRQGKIWR
HQVGELEFNEAALQALRGKGLAELACEAPALTDWRSAYSVAGLRLNTEQA
TAVGAIHSAADRFSAWLLAGITGSGKTEVYLSVLENVLAQGRQALVMVPE
IGLTPQTIARFRQRFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTR
SSLFTPFKDLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSEQIPIIL
GSATPALETLHNVRQGKYRQLTLSKAQQHVLDLKGQPLQAGLSPALISRM
RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDSYYTLHQAQHHL
RCHHCDSQRPIPRQCPSCGSTHLVPVGIGTEQLEQALAPLFPEVPISRIR
GGARILIGTQMLAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQ
VSGRAGRAGKQGEVILQTHHPEHPLLQTLLYKGYDAFAEQALAERQTMQL
PPWTSHVLIRAEDHNNQQAPLFLQQLRNLLQASPLADEKLWVLGPVPALA
PKRGGRWRWQILLQHPSRVRLQHIVSGTLALINTLPEARKVKWVLDVDPI
E
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6dgd Structure-specific DNA replication-fork recognition directs helicase and replication restart activities of the PriA helicase.
Resolution2.823 Å
Binding residue
(original residue number in PDB)		R14 F16 D17 Y18 F36 G37 L59 K60
Binding residue
(residue number reindexed from 1)		R13 F15 D16 Y17 F35 G36 L58 K59
Enzymatic activity
Enzyme Commision number 3.6.4.-
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003678 DNA helicase activity
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0008270 zinc ion binding
GO:0016787 hydrolase activity
GO:0043138 3'-5' DNA helicase activity
GO:0046872 metal ion binding
Biological Process
GO:0006260 DNA replication
GO:0006268 DNA unwinding involved in DNA replication
GO:0006269 DNA replication, synthesis of primer
GO:0006270 DNA replication initiation
GO:0006302 double-strand break repair
GO:0006310 DNA recombination
GO:0032508 DNA duplex unwinding
Cellular Component
GO:1990077 primosome complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6dgd, PDBe:6dgd, PDBj:6dgd
PDBsum6dgd
PubMed30201718
UniProtA0A1W2ITH4

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