Structure of PDB 5znp Chain B Binding Site BS02

Receptor Information
>5znp Chain B (length=186) Species: 3694 (Populus trichocarpa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AKAKAPRRTLDSYTVKPINKTVKPGDCVLMRPSDPSKPSYVAKIERIESD
GRGPNVRVRVRWYYRPEESIGGRRQFHGSKEVFLSDHYDTQSADTIEGKC
MVHSFKNYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPD
DLMVQCEGCSDWFHPACIEMSAEEAKRLDHFFCENC
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5znp Chain B Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5znp Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		C142 C144 H165 C168
Binding residue
(residue number reindexed from 1)		C141 C143 H164 C167
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003682 chromatin binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5znp, PDBe:5znp, PDBj:5znp
PDBsum5znp
PubMed29930355
UniProtB9H0V2

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