Structure of PDB 5ohb Chain B Binding Site BS02

Receptor Information
>5ohb Chain B (length=105) Species: 431944 (Magnetospirillum gryphiswaldense MSR-1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ASIFRCRQCGQTISRRDWLLPMGGDHEHVVFNPAGMIFRVWCFSLAQGLR
LIGAPSGEFSWFKGYDWTIALCGQCGSHLGWHYEGGSQPQTFFGLIKDRL
AEGPA
Ligand information
Ligand IDV1L
InChIInChI=1S/C5H9NO/c7-5-3-1-2-4-6-5/h1-4H2,(H,6,7)
InChIKeyXUWHAWMETYGRKB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.6C1CCNC(=O)C1
CACTVS 3.385O=C1CCCCN1
FormulaC5 H9 N O
Namepiperidin-2-one;
valerolactam
ChEMBLCHEMBL12193
DrugBank
ZINCZINC000003860817
PDB chain5ohb Chain B Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5ohb Chemical Ligand Space of Cereblon.
Resolution1.7 Å
Binding residue
(original residue number in PDB)		F77 S78 W79 W85 W99 Y101
Binding residue
(residue number reindexed from 1)		F59 S60 W61 W67 W81 Y83
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5ohb, PDBe:5ohb, PDBj:5ohb
PDBsum5ohb
PubMed31459225
UniProtA4TVL0

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