Structure of PDB 5n8b Chain B Binding Site BS02
Receptor Information
>5n8b Chain B (length=120) Species:
1895
(Streptomyces avidinii) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPA
TDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTSGTT
EANAWKSTLVGHDTFTKVKP
Ligand information
>5n8b Chain C (length=12) Species:
32630
(synthetic construct) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
AFPDYLAEYHGG
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5n8b
Stepwise Evolution Improves Identification of Diverse Peptides Binding to a Protein Target.
Resolution
1.03 Å
Binding residue
(original residue number in PDB)
L25 S27 Y43 S45 S52 Y54 W79 R84 A86 S88 T90 W108 L110 S112 L124 D128
Binding residue
(residue number reindexed from 1)
L10 S12 Y28 S30 S37 Y39 W64 R69 A71 S73 T75 W93 L95 S97 L109 D113
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0009374
biotin binding
View graph for
Molecular Function
External links
PDB
RCSB:5n8b
,
PDBe:5n8b
,
PDBj:5n8b
PDBsum
5n8b
PubMed
28935886
UniProt
P22629
|SAV_STRAV Streptavidin
[
Back to BioLiP
]