Structure of PDB 5ma0 Chain B Binding Site BS02
Receptor Information
>5ma0 Chain B (length=419) Species:
1150621
(Sulfurospirillum multivorans DSM 12446) [
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AAEIRQQFAMTAGSPIIVNDKLERYAEVRTAFTHPTSFFKPNYKGEVKPW
FLSAYDEKVRQIENGENGPKMKAKNVGEARAGRALEAAGWTLDINYGNIY
PNRFFMLWSGETMTNTQLWAPVGLDRRPPDTTDPVELTNYVKFAARMAGA
DLVGVARLNRNWVYSEAVTIPADVPYEQSLHKEIEKPIVFKDVPLPIETD
DELIIPNTCENVIVAGIAMNREMMQTAPNSMACATTAFCYSRMCMFDMWL
CQFIRYMGYYAIPSCNGVGQSVAFAVEAGLGQASRMGACITPEFGPNVRL
TKVFTNMPLVPDKPIDFGVTEFCETCKKCARECPSKAITEGPRTFEGRSI
HNQSGKLQWQNDYNKCLGYWPESGGYCGVCVAVCPFTKNITEVWDGKINT
YGLDADHFRDTVSFRKDRV
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
5ma0 Chain B Residue 502 [
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Receptor-Ligand Complex Structure
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PDB
5ma0
Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
C339 P340 S341 I344 C372 C383 G384 C386
Binding residue
(residue number reindexed from 1)
C333 P334 S335 I338 C366 C377 G378 C380
Annotation score
4
External links
PDB
RCSB:5ma0
,
PDBe:5ma0
,
PDBj:5ma0
PDBsum
5ma0
PubMed
28671181
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