Structure of PDB 5m5u Chain B Binding Site BS02

Receptor Information
>5m5u Chain B (length=360) Species: 9913 (Bos taurus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVII
DMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT
MTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQI
INYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQ
FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP
PEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETI
FVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAV
RNNLAGAEEL
Ligand information
>5m5u Chain H (length=6) Species: 10423 (Hepatitis delta virus (ISOLATE ITALIAN)) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
DILFPA
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5m5u Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Resolution2.15 Å
Binding residue
(original residue number in PDB)		F9 Q10 E11 R297 S299
Binding residue
(residue number reindexed from 1)		F6 Q7 E8 R294 S296
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0030130 clathrin coat of trans-Golgi network vesicle
GO:0030132 clathrin coat of coated pit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5m5u, PDBe:5m5u, PDBj:5m5u
PDBsum5m5u
PubMed27813245
UniProtP49951|CLH1_BOVIN Clathrin heavy chain 1 (Gene Name=CLTC)

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