Structure of PDB 5m5t Chain B Binding Site BS02

Receptor Information
>5m5t Chain B (length=360) Species: 9913 (Bos taurus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVII
DMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT
MTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQI
INYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQ
FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP
PEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETI
FVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAV
RNNLAGAEEL
Ligand information
Receptor-Ligand Complex Structure
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PDB5m5t Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Resolution1.7 Å
Binding residue
(original residue number in PDB)
L5 I7 F9 Q10 E11 H12 N296 R297 I298 S299
Binding residue
(residue number reindexed from 1)
L2 I4 F6 Q7 E8 H9 N293 R294 I295 S296
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0030130 clathrin coat of trans-Golgi network vesicle
GO:0030132 clathrin coat of coated pit

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:5m5t, PDBe:5m5t, PDBj:5m5t
PDBsum5m5t
PubMed27813245
UniProtP49951|CLH1_BOVIN Clathrin heavy chain 1 (Gene Name=CLTC)

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