Structure of PDB 5khw Chain B Binding Site BS02
Receptor Information
>5khw Chain B (length=278) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKHIADL
KKEIEILRNLYHENIVKYKGICTENGIKLIMEFLPSGSLKEYLPKNKNKI
NLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT
KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL
TYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVY
QLMRKCWEFQPSNRTSFQNLIEGFEALL
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
5khw Chain B Residue 1202 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5khw
Development of a high-throughput crystal structure-determination platform for JAK1 using a novel metal-chelator soaking system.
Resolution
2.47 Å
Binding residue
(original residue number in PDB)
N1008 D1021
Binding residue
(residue number reindexed from 1)
N133 D146
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
D1003 A1005 R1007 N1008 D1021 D1040
Catalytic site (residue number reindexed from 1)
D128 A130 R132 N133 D146 D165
Enzyme Commision number
2.7.10.2
: non-specific protein-tyrosine kinase.
Gene Ontology
Molecular Function
GO:0004672
protein kinase activity
GO:0004713
protein tyrosine kinase activity
GO:0005524
ATP binding
Biological Process
GO:0006468
protein phosphorylation
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5khw
,
PDBe:5khw
,
PDBj:5khw
PDBsum
5khw
PubMed
27827355
UniProt
P23458
|JAK1_HUMAN Tyrosine-protein kinase JAK1 (Gene Name=JAK1)
[
Back to BioLiP
]