Structure of PDB 5jzd Chain B Binding Site BS02
Receptor Information
>5jzd Chain B (length=377) Species:
83333
(Escherichia coli K-12) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADA
KAQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEKQASARRFTRSQS
LNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDS
GVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAG
SARRQPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPS
SPQLITTPTLWHLATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQ
VIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFAGAGI
VPASSPLGEWRETGVKLSTMLNVFGLH
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
5jzd Chain B Residue 402 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5jzd
An Open and Shut Case: The Interaction of Magnesium with MST Enzymes.
Resolution
2.303 Å
Binding residue
(original residue number in PDB)
E241 E376
Binding residue
(residue number reindexed from 1)
E227 E362
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
K147 E197 A213 E241 H276 A303 F327 R347 G363 E376 K380
Catalytic site (residue number reindexed from 1)
K133 E183 A199 E227 H262 A289 F313 R333 G349 E362 K366
Enzyme Commision number
5.4.4.2
: isochorismate synthase.
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0008909
isochorismate synthase activity
GO:0016853
isomerase activity
GO:0046872
metal ion binding
Biological Process
GO:0009058
biosynthetic process
GO:0009239
enterobactin biosynthetic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5jzd
,
PDBe:5jzd
,
PDBj:5jzd
PDBsum
5jzd
PubMed
27373320
UniProt
P0AEJ2
|ENTC_ECOLI Isochorismate synthase EntC (Gene Name=entC)
[
Back to BioLiP
]