Structure of PDB 5hev Chain B Binding Site BS02

Receptor Information
>5hev Chain B (length=209) Species: 1244155 (Enterococcus faecium SD3B-2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MIKVLLVDDHEMVRLGVSSYLSIQEDIEVIGEAENGRQGYEKAMALRPDV
ILMDLVMEEMDGIESTKAILKDWPKAKIIIVTSFIDDEKVYPAIEAGAAG
YLLKTSTAHEIADAIRATQRGERVLEPEVTTKMMEKMSRRNDPVLHEELT
NRENEILMLISEGKSNQEIADELFITLKTVKTHVSNILAKLEVEDRTQAA
IYAFKHGLV
Ligand information
Ligand IDBEF
InChIInChI=1S/Be.3FH/h;3*1H/q+2;;;/p-3
InChIKeyOGIAHMCCNXDTIE-UHFFFAOYSA-K
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[Be-](F)(F)F
ACDLabs 10.04
CACTVS 3.341		F[Be-](F)F
FormulaBe F3
NameBERYLLIUM TRIFLUORIDE ION
ChEMBL
DrugBank
ZINC
PDB chain5hev Chain B Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5hev An Adaptive Mutation in Enterococcus faecium LiaR Associated with Antimicrobial Peptide Resistance Mimics Phosphorylation and Stabilizes LiaR in an Activated State.
Resolution3.192 Å
Binding residue
(original residue number in PDB)		D54 L55 V56 T82 S83 K104
Binding residue
(residue number reindexed from 1)		D54 L55 V56 T82 S83 K104
Annotation score1
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 06:05:43 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '5hev', asym_id = 'B', bs = 'BS02', title = 'An Adaptive Mutation in Enterococcus faecium Lia...ation and Stabilizes LiaR in an Activated State. '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='5hev', asym_id='B', bs='BS02', title='An Adaptive Mutation in Enterococcus faecium Lia...ation and Stabilizes LiaR in an Activated State. ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0000160,0003677,0006355', uniprot = '', pdbid = '5hev', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0000160,0003677,0006355', uniprot='', pdbid='5hev', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>