Structure of PDB 5fb7 Chain B Binding Site BS02
Receptor Information
>5fb7 Chain B (length=151) Species:
1077442
(Talaromyces marneffei PM1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DISAFQKVIQDISLAVNKFNVDIERYVGGDASHLLADGNVLIKATLDGVQ
SLQNEPPLSSMEALALVGPVQDLSNQILLAIQNLIDKKEPLVQAGFGGKV
ENNLRQQEEAAQKLSELVSTKVPHELADISRQLSDGIAAGIKKGIDAFAG
T
Ligand information
Ligand ID
ACD
InChI
InChI=1S/C20H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20(21)22/h6-7,9-10,12-13,15-16H,2-5,8,11,14,17-19H2,1H3,(H,21,22)/b7-6-,10-9-,13-12-,16-15-
InChIKey
YZXBAPSDXZZRGB-DOFZRALJSA-N
SMILES
Software
SMILES
CACTVS 3.341
CCCCC/C=C\C\C=C/C/C=C\C\C=C/CCCC(O)=O
ACDLabs 10.04
O=C(O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC
OpenEye OEToolkits 1.5.0
CCCCCC=CCC=CCC=CCC=CCCCC(=O)O
OpenEye OEToolkits 1.5.0
CCCCC\C=C/C\C=C/C\C=C/C\C=C/CCCC(=O)O
CACTVS 3.341
CCCCCC=CCC=CCC=CCC=CCCCC(O)=O
Formula
C20 H32 O2
Name
ARACHIDONIC ACID
ChEMBL
CHEMBL15594
DrugBank
DB04557
ZINC
ZINC000004474696
PDB chain
5fb7 Chain B Residue 202 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5fb7
Talaromyces marneffei Mp1p Is a Virulence Factor that Binds and Sequesters a Key Proinflammatory Lipid to Dampen Host Innate Immune Response
Resolution
1.5 Å
Binding residue
(original residue number in PDB)
I15 L72 V76 L79 V124 S136 L139
Binding residue
(residue number reindexed from 1)
I9 L66 V70 L73 V118 S130 L133
Annotation score
4
Binding affinity
MOAD
: Kd=0.000000064M
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5fb7
,
PDBe:5fb7
,
PDBj:5fb7
PDBsum
5fb7
PubMed
28111099
UniProt
A0A093VKV7
[
Back to BioLiP
]