Structure of PDB 5eim Chain B Binding Site BS02

Receptor Information
>5eim Chain B (length=161) Species: 284812 (Schizosaccharomyces pombe 972h-) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EKGERISMINPRVVLDENGISHRSRYFIMLCDNETAIAHAKKTSIWAVKK
DSSKRISDAYKKASVYFIFVAQQTYNALGYAQVVSDLNSTELPFWSDSSH
AGGVRIKWIKTCNLFSAEISEIVSHMDHGSEARDGMEMMYDEGSRLCTLI
NYAIMKRIGRD
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5eim Structural insights into the specific recognition of DSR by the YTH domain containing protein Mmi1
Resolution1.54 Å
Binding residue
(original residue number in PDB)
N336 R338 Y352 Y392 Y406 K436 T437 Y466 C473 N477 R483
Binding residue
(residue number reindexed from 1)
N10 R12 Y26 Y66 Y80 K110 T111 Y140 C147 N151 R157
Binding affinityPDBbind-CN: Kd=1.1uM
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:5eim, PDBe:5eim, PDBj:5eim
PDBsum5eim
PubMed28735863
UniProtO74958|MMI1_SCHPO RNA binding exosome specificity factor Mmi1 (Gene Name=mmi1)

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