Structure of PDB 5cg1 Chain B Binding Site BS02
Receptor Information
>5cg1 Chain B (length=248) Species:
83333
(Escherichia coli K-12) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF
AAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLD
GDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER
AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTFRKMLAH
CEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN
Ligand information
Ligand ID
BBN
InChI
InChI=1S/C8H8BN3O2/c10-8(13)12-9(14)7-4-2-1-3-6(7)5-11-12/h1-5,14H,(H2,10,13)
InChIKey
CNLKBXXRSGCDQQ-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.9.2
B1(c2ccccc2C=NN1C(=O)N)O
ACDLabs 12.01
B2(c1c(cccc1)C=NN2C(N)=O)O
CACTVS 3.385
NC(=O)N1N=Cc2ccccc2B1O
Formula
C8 H8 B N3 O2
Name
1-hydroxy-2,3,1-benzodiazaborinine-2(1H)-carboxamide
ChEMBL
CHEMBL5186997
DrugBank
ZINC
PDB chain
5cg1 Chain B Residue 501 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5cg1
Crystallographic insights into the structure-activity relationships of diazaborine enoyl-ACP reductase inhibitors.
Resolution
2.07 Å
Binding residue
(original residue number in PDB)
G93 Y146 Y156 K163
Binding residue
(residue number reindexed from 1)
G92 Y145 Y155 K162
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
M127 S145 Y156 M159 K163
Catalytic site (residue number reindexed from 1)
M126 S144 Y155 M158 K162
Enzyme Commision number
1.3.1.9
: enoyl-[acyl-carrier-protein] reductase (NADH).
Gene Ontology
Molecular Function
GO:0004318
enoyl-[acyl-carrier-protein] reductase (NADH) activity
GO:0005515
protein binding
GO:0016491
oxidoreductase activity
GO:0042802
identical protein binding
GO:0070404
NADH binding
Biological Process
GO:0006633
fatty acid biosynthetic process
GO:0008610
lipid biosynthetic process
GO:0009102
biotin biosynthetic process
GO:0030497
fatty acid elongation
GO:0046677
response to antibiotic
GO:0051289
protein homotetramerization
Cellular Component
GO:0005829
cytosol
GO:0016020
membrane
GO:0032991
protein-containing complex
GO:1902494
catalytic complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5cg1
,
PDBe:5cg1
,
PDBj:5cg1
PDBsum
5cg1
PubMed
26625295
UniProt
P0AEK4
|FABI_ECOLI Enoyl-[acyl-carrier-protein] reductase [NADH] FabI (Gene Name=fabI)
[
Back to BioLiP
]