Structure of PDB 5bpi Chain B Binding Site BS02
Receptor Information
>5bpi Chain B (length=263) Species:
2261
(Pyrococcus furiosus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SKDRMVELLQEHFELNLYEARAYVALVAFGVLTPAELASVSEVPAPRTYD
VLRSLEKKGFAMTQPGKTNKYRPVHPANVLEKFIQDWQERVKEELEAKKK
AKEELLELMAPLIETEVPKYGVERVWVVRGIKNSTLKTKEMLEEAQNEIL
LADDGFIAVNLEDDIIKAVDRGVKTKILLTKNLLPRLKASKIIDYAKEGK
LELRALDKFDLPMLICDEEVFFALEDLAARYFNYETQVWIKDHRVVALFK
EKFNEYWEKAEKV
Ligand information
>5bpi Chain F (length=21) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tatatcactatcgatgatata
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5bpi
Structural Insights into Nonspecific Binding of DNA by TrmBL2, an Archaeal Chromatin Protein.
Resolution
3.198 Å
Binding residue
(original residue number in PDB)
L18 Y19 P45 P47 R48
Binding residue
(residue number reindexed from 1)
L17 Y18 P44 P46 R47
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
View graph for
Molecular Function
External links
PDB
RCSB:5bpi
,
PDBe:5bpi
,
PDBj:5bpi
PDBsum
5bpi
PubMed
26299937
UniProt
Q8U3H1
|TMBL2_PYRFU Putative HTH-type transcriptional regulator TrmBL2 (Gene Name=trmBL2)
[
Back to BioLiP
]