Structure of PDB 5ag1 Chain B Binding Site BS02

Receptor Information
>5ag1 Chain B (length=445) Species: 29892 (Auricularia auricula-judae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LNTDDIQGDILVGMHKQKQLFYFFAINDPATFKTHLASDIAPVVASVTQL
SNVATQPLVALNIAFSNTGLLALGVTDNLGDSLFANGQAKDATSFKESTS
SWVPQFAGTGIHGVIILASDTTDLIDQQVASIESTFGSSISKLYSLSASI
RPGNEAGHEMFGFLDGIAQPAINGFNTPLPGQNIVDAGVIITGATNDPIT
RPSWAVGGSFLAFRQLEQLVPEFNKYLLDNAPAGSGSLQARADLLGARMV
GRWKSGAPIDLTPTADDPALGADAQRNNNFTYSHAGFDLGSDQSHCPFSA
HIRKTRPRADLGGSLTPPNLSAGANSIMRSGIPYGPEVTSAESASNTTTQ
ERGLAFVAYQAQLSQGFHFLQQTWADNANFPPGKTPATVGLDPIIGQNNG
QPRVVNGLLPSNSSASLSIPQFVVSHGGEYFFSPPISAIGGRLSA
Ligand information
Ligand IDNO2
InChIInChI=1S/HNO2/c2-1-3/h(H,2,3)/p-1
InChIKeyIOVCWXUNBOPUCH-UHFFFAOYSA-M
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341		[O-]N=O
OpenEye OEToolkits 1.5.0N(=O)[O-]
FormulaN O2
NameNITRITE ION
ChEMBL
DrugBankDB12529
ZINC
PDB chain5ag1 Chain B Residue 1457 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5ag1 Crystallographic Trapping of a Covalently Modified Heme in a Dye-Decolorizing Peroxidase
Resolution1.85 Å
Binding residue
(original residue number in PDB)		R332 F359
Binding residue
(residue number reindexed from 1)		R329 F356
Annotation score1
Enzymatic activity
Enzyme Commision number 1.11.1.19: dye decolorizing peroxidase.
1.11.1.7: peroxidase.
Gene Ontology
Molecular Function
GO:0004601 peroxidase activity
GO:0020037 heme binding
GO:0046872 metal ion binding
GO:0140825 lactoperoxidase activity
Biological Process
GO:0098869 cellular oxidant detoxification
Cellular Component
GO:0005576 extracellular region
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5ag1, PDBe:5ag1, PDBj:5ag1
PDBsum5ag1
PubMed
UniProtI2DBY1|DYP_AURAJ Dye-decolorizing peroxidase AauDyP1 (Gene Name=dyp1)

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